Gene Pden_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3466 
Symbol 
ID4582022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp610387 
End bp611307 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID639770780 
ProductLysR family transcriptional regulator 
Protein accessionYP_917233 
Protein GI119386178 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCT TCACGCTGCG CCAATGCGCC TATTTCCGCG CCGTCGCCGA GCATGGCGGC 
ATTGCGCAGG CCGCGCGCGC GCTGAACATC TCTCAGCCCT CGGTGGCGCA GGCGCTGGAA
AAGCTCGAGG ACGTGACCCG TCTGGTGCTG TTCGAGCGGC ATCATGCGCG CGGGCTGACG
CTGACGCTGC AGGGCCGGCT GTTCCTTGAG CATGTGAACC GCCTCGAGGA ACAGGCCGGG
CAGGTCGAGC GCGAGGCGGC GGCACTGGCG GCCGAGACCG CCGGAGAGAT CCGGCTGGGC
GTGTTCCGAA CGCTGTCGCC CTTTTACGCC GCGGGGCTGA TCCGCAGTTT CGGCGAGGCG
GTGCCGGGGG TGATCGTGCG GCAGCGCGAG ATGGCGCTGG CCAATCTGGC CGATGCGCTG
CGCGACGGCT CGATCGACCT GGCACTGACC TATGATCGGG GCAGCGATCC CCAGGGGCTG
GCCTTCGTGC AGCTTGCGGC ATTGCGACCG ATGGTGGTTC TTGCCGCCGA TCACCCGCTT
GCCGGGCGCG ATTCCATCGA CCTCGCCGAT CTGGCCGACG AGCCCTATGT CATGCTGGAA
GGGCCCGGAA GCCGCAGCTA TTTCGAGGAG CTTCTGGCCG AAAGCGGGAT CAGCCCGCCG
GTCTCCTACG TCTCGACCTC GCTGGAGGCG GTGCGCAGTG CGGTCGCGGC GGGTTTCGGC
TTTACGCTGC TGGTGATGCG GCCCCCGTCG TCGATGACCT ATGACGGGGG CGAGGTCAGG
ACCTTGCCGA TCACGAACGA CCTGCGCCCG CTGCGCATCG TGCTGGCCTC GCGCGATGGC
GCGCATCGGG GACTTGTCGC GCGGCGCTTC ACCCAGCATG CCATTGGCTA TTTCGCCGCC
CGCCATCACG CCCCGGCCTG A
 
Protein sequence
MVRFTLRQCA YFRAVAEHGG IAQAARALNI SQPSVAQALE KLEDVTRLVL FERHHARGLT 
LTLQGRLFLE HVNRLEEQAG QVEREAAALA AETAGEIRLG VFRTLSPFYA AGLIRSFGEA
VPGVIVRQRE MALANLADAL RDGSIDLALT YDRGSDPQGL AFVQLAALRP MVVLAADHPL
AGRDSIDLAD LADEPYVMLE GPGSRSYFEE LLAESGISPP VSYVSTSLEA VRSAVAAGFG
FTLLVMRPPS SMTYDGGEVR TLPITNDLRP LRIVLASRDG AHRGLVARRF TQHAIGYFAA
RHHAPA