| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3258 |
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| Symbol | |
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| ID | 4581820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 420838 |
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| End bp | 421839 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770580 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_917033 |
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| Protein GI | 119385978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.272533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0638334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTT ATGCGATCCT TGCCGCGATC ACTCTGGGCT GCGCCCTGCC GGCACAGGCG
GAGAAACTGG TTCTGGCGCA TGGCTATGCC CCGAGCCACA ACGTCCTTGT CCACGGGATC
GTGCCGTGGA TGGCCTGCGT CCGCGACGGC ACACAGAACG CCTATGACTT CGACCATTTC
CCGTCCGGGC AGATTTCTGG GCATACGCAG TCGGTGTCCT CGCTCAACAG CGGGCTGGCG
GATCTGTCGG TGATCGTGGT GGCCTATTCC AGCGACAAGG TGCCGATGAA CGGCATTCCG
CTGCTGCCGG GCATGGGGAC CACCTCGGTC GAAATGGTCG GTGCCTATCG CCGCGCGCTG
TCTCAGGACG GTATTCTGGC GGGCGAATAT GCCGCGATAG ACACCGTGCC GCTGCTGGTC
AGTATCCTGC CGGCCTATCA GGTGTTCTCA ACCATCGGCC CGATCGACAC GCTTGAAAAA
TTCGCGGGCT TCAAGGTCAG GGTGTCCGGC GGCTCACCCA CCTTCATGGC GCAATCGCTG
GGCGCGATCC CGATCGAGAT CAACGCCACC GACATGTATA TCGCACTGCA ACGCAAGACG
GTCGACGGCA CTTTCCTCAC GATGTCCAGC GCCAAGCCCT ATGCCATCCA CGAGCTCGTG
AACGCGGTAT CGACCAATGG CTCCTTCGGC TCGGGTTCCA GCGTGCTGGC GATGGACCGA
GGCAAGTTCG AGGCGTTGCC ACCCGAACAC CGGCAGGTCT TTGTCGATTG CGGGCTCGAG
GCCGAGATGG CCACTGCCGA ATATGTCGAT GCCGAGAACG CGGCGGTGCA GGCGGAATTC
GTCACGCTGG GCATCGACGC CTTCGCTTAT CCTGATGACG TGCTGGAGGT CCTGGCGGCC
CGCATGTCGC AAGTGACCTC GGAGTATATC GGTCGCTTGA CCGACCGTGG CCTACCTGCC
GCCGAGGCGT TGCAGGAATA CCAGAACGCG CGCGCCGACT GA
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| Protein sequence | MRLYAILAAI TLGCALPAQA EKLVLAHGYA PSHNVLVHGI VPWMACVRDG TQNAYDFDHF
PSGQISGHTQ SVSSLNSGLA DLSVIVVAYS SDKVPMNGIP LLPGMGTTSV EMVGAYRRAL
SQDGILAGEY AAIDTVPLLV SILPAYQVFS TIGPIDTLEK FAGFKVRVSG GSPTFMAQSL
GAIPIEINAT DMYIALQRKT VDGTFLTMSS AKPYAIHELV NAVSTNGSFG SGSSVLAMDR
GKFEALPPEH RQVFVDCGLE AEMATAEYVD AENAAVQAEF VTLGIDAFAY PDDVLEVLAA
RMSQVTSEYI GRLTDRGLPA AEALQEYQNA RAD
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