Gene Pden_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3240 
Symbol 
ID4581804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp405618 
End bp406619 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID639770564 
Producthypothetical protein 
Protein accessionYP_917017 
Protein GI119385962 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGAA CATTCTGTCT GATCCCGTTT CTGCTCGCGC TGGCACCGCT CGCCGCCGCG 
GAAGAACGGC CTGCCGGGGA GGTTGCCATG ATCGCGGAAC AAAGCGTCGA GGTTCTGGGC
GAGCATCTGA CAGCCGACGG GCGGCTAGCC GACATTCTCG ACAATCCCGC CTTTGCCGGA
TTTGCCGAGC GCATCCTGCC TTGGGCAGGC CGCCGCTACG ACCCCGCAAT GCCGCTCGGC
CAGATGGCCA GTCTGCTGCC CTATCATAGC GCCGTCGATA CCGGCACGGT CGTCGCTGCC
CTGAACCGGA TGATCGACGA CGCGGGCGCC GGTCAGACGG TGTTCTACGA CATCTACTCC
GAAGCGGAGA GGCGGGCCGA CCCCGCCAAA GCCGCGACCG GCCTGTTCTT CTACCGGGGC
CGCCCCGGTG CCCCCTTCGC GGTGATCGCG CCGGGCGGCG GCTTCTCCTA TGTCGGTTCG
GTGCATGAGG GCTTCCCCTA TGCAGAGGCG ATCAGCGATC TCGGGCTGAA CGCCTTCGTC
CTGACCTATC GTGCTGGCCA GGGCGGTCAG GTCGCCACCG AGGATCTGGC CGCTGCAATC
ACCTGGATTT TCCGCAACGC GGAAGAACTG GGTGTCGGCA CCGACGGCTA TTCCCTGTGG
GGCAGTTCGG CGGGCGCCCG GATGGCGGCC TATATCGGCT CGCACGGGCC TGCCGCCTTC
GGTGGGGCCA ATCTGCCGAA GCCGGCTGCC GTCGTCATGG CCTATACCAG CCATTCCGAT
CTGGCCGAGA CAGAGCCGCC GACCTTCGTG GTCGTGGGCG AACGGGACGG CATCGCCCCG
CCCGGCAACA TGGAGCGCCG GATCGCCGCC CTGCGCCGGA TCGGCACGCC GGTCGAATAT
CACCTCTTTC CCAATGTCGG TCACGGCTTC GGGGCCGGCA CCGGCACCAG CGCCGAGGGC
TGGATCGCCG AGGCCGTTCG TTTCTGGCGG CAGCAATTGT GA
 
Protein sequence
MRRTFCLIPF LLALAPLAAA EERPAGEVAM IAEQSVEVLG EHLTADGRLA DILDNPAFAG 
FAERILPWAG RRYDPAMPLG QMASLLPYHS AVDTGTVVAA LNRMIDDAGA GQTVFYDIYS
EAERRADPAK AATGLFFYRG RPGAPFAVIA PGGGFSYVGS VHEGFPYAEA ISDLGLNAFV
LTYRAGQGGQ VATEDLAAAI TWIFRNAEEL GVGTDGYSLW GSSAGARMAA YIGSHGPAAF
GGANLPKPAA VVMAYTSHSD LAETEPPTFV VVGERDGIAP PGNMERRIAA LRRIGTPVEY
HLFPNVGHGF GAGTGTSAEG WIAEAVRFWR QQL