Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3176 |
Symbol | |
ID | 4581740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 345773 |
End bp | 346171 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639770500 |
Product | hypothetical protein |
Protein accession | YP_916953 |
Protein GI | 119385898 |
COG category | [R] General function prediction only |
COG ID | [COG5611] Predicted nucleic-acid-binding protein, contains PIN domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGCA TCGATACCAA TGTGCTGGTG CGCTATCTGG CGCAGGACGA CGCCGCACAG GCGGCCATCG CCACGGAGAT CGTCGAGGGC TTTACGCCGG AAGAGCCCGG CTTCGTCTCG CAGGTGGTGC TGGTGGAAAC CGTCTGGGTG CTGACGCGTG CCTATCGGAT GACGCGCGAG GCCATGGCCG ATGCCGTGGA GGTGCTGCTG CGGTCGCGCG AGTTGATCGT GGAGCACACG GAGGCCGGTT ATCTGGCGCT GGCCACCTAT CGCGCCACCA AGGCGGATTT CGCCGATGCG CTAATCGCGC ATGGCGGGCG GCTCGAAGGC TGCAGCGAGA CCCTGACCTT CGACCGCGGC GCCGCGAGCC ATGCCGGCAT GCGGCTGCTC GGATCCTGA
|
Protein sequence | MIGIDTNVLV RYLAQDDAAQ AAIATEIVEG FTPEEPGFVS QVVLVETVWV LTRAYRMTRE AMADAVEVLL RSRELIVEHT EAGYLALATY RATKADFADA LIAHGGRLEG CSETLTFDRG AASHAGMRLL GS
|
| |