Gene Pden_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3176 
Symbol 
ID4581740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp345773 
End bp346171 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID639770500 
Producthypothetical protein 
Protein accessionYP_916953 
Protein GI119385898 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA TCGATACCAA TGTGCTGGTG CGCTATCTGG CGCAGGACGA CGCCGCACAG 
GCGGCCATCG CCACGGAGAT CGTCGAGGGC TTTACGCCGG AAGAGCCCGG CTTCGTCTCG
CAGGTGGTGC TGGTGGAAAC CGTCTGGGTG CTGACGCGTG CCTATCGGAT GACGCGCGAG
GCCATGGCCG ATGCCGTGGA GGTGCTGCTG CGGTCGCGCG AGTTGATCGT GGAGCACACG
GAGGCCGGTT ATCTGGCGCT GGCCACCTAT CGCGCCACCA AGGCGGATTT CGCCGATGCG
CTAATCGCGC ATGGCGGGCG GCTCGAAGGC TGCAGCGAGA CCCTGACCTT CGACCGCGGC
GCCGCGAGCC ATGCCGGCAT GCGGCTGCTC GGATCCTGA
 
Protein sequence
MIGIDTNVLV RYLAQDDAAQ AAIATEIVEG FTPEEPGFVS QVVLVETVWV LTRAYRMTRE 
AMADAVEVLL RSRELIVEHT EAGYLALATY RATKADFADA LIAHGGRLEG CSETLTFDRG
AASHAGMRLL GS