Gene Pden_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3167 
Symbol 
ID4581731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp341031 
End bp341438 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID639770491 
Productsingle-strand binding protein 
Protein accessionYP_916944 
Protein GI119385889 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.860724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.558522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA TCGTCATCCT CGCCGGCACC ATCCGCCAGG CCCCCGAGAC CCGCACCACC 
CGCACCGGCA CCGACGTTAC CCGCTTCAAG CTGGTCACCT CGCGCCCGCG CTATTCGGAA
GGCCGGGTCG TGCGCGACGA GAAGGGCTAT CGGGTCGAGG ACGCGGAATG GCACCGCGTC
GTCGCCTTCA ACGGCCTGGG CCGGACCATC CGGCAATATT GCGAGTCCGG CACGAAGGTG
CTGGTGCGCG GCCGCATCCA CTACACGAAA TGGCAGGATG CGGAAGGCCA GGACCGCTAC
GGCTGCGAGA TCGTCGCCGA GACGGTGGAT TTCCTGAGCC GGGCGCCGCA GACCGAGATC
GACGAGGACG AGGGCCGGTT CATCGACGAA GACGACATCC CCTCCTGA
 
Protein sequence
MQNIVILAGT IRQAPETRTT RTGTDVTRFK LVTSRPRYSE GRVVRDEKGY RVEDAEWHRV 
VAFNGLGRTI RQYCESGTKV LVRGRIHYTK WQDAEGQDRY GCEIVAETVD FLSRAPQTEI
DEDEGRFIDE DDIPS