| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3100 |
|---|
| Symbol | |
|---|
| ID | 4581664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 286684 |
|---|
| End bp | 287430 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639770424 |
|---|
| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| Protein accession | YP_916877 |
|---|
| Protein GI | 119385822 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA TCCATCCCGG CGATGACCAT ATCTTCGAGG GCCGCCCTCT GGGCGCCCCC
CATCAGGTTA CCCGGCAAAC CTCGGTCTAT GTCTATGAGG CGCCGGTTCG CATTTGGCAC
TGGATCAACG CGGCCTGCAT CATGGTCTTG TGCGTGACCG GCTGGCTTAT CGGCAGCCCG
CCGCCTTCGA TGCAGATCGC TGAAGCCTAT GACCAGTTCG TCTTCGGCTA TATCCGCTTT
GCCCATTTCG CGGCGGCTAT GATCCTGACG GTGGGCTTTT TCGGCCGCAT CTACTGGGCG
CTGATCGGCA ACCACCATGC AAAGCAGCTT TTCTATGTGC CGATCTTCTC TCGCCGGTTC
TGGGGAGAGT TACTGTTCGA GCTGCGCTGG TACTTCTTTC TGGAAAAAGA GCCGAAGAAA
TATGTCGGCC ACAACCCGCT GGCGCAGCTT GCGATGTTTC TGTTCATGAC GGTCGGTCTG
ACCTTCATGA TCGTCACCGG ATTTGCGCTG TATGCCGAAG GGGCGGGCAA GGACAGCATG
TTCTATGCCG TCTTCGGCTG GGTCCAGGAC CTTGTTCAGA ACACCCAGCG CCTGCACACG
CTGCACCATA TCGGCATGTG GTGGATCGTG ATCTTCATGA TCATCCATAT CTATGTGGCG
ATCCGCGAAG ACATCATGTC GCGCCAGTCG ATGGTCTCGA CGATGATCTC GGGACACCGC
ACCTTCAAGG ATGATCGCCC CGACTGA
|
|---|
| Protein sequence | MSDIHPGDDH IFEGRPLGAP HQVTRQTSVY VYEAPVRIWH WINAACIMVL CVTGWLIGSP
PPSMQIAEAY DQFVFGYIRF AHFAAAMILT VGFFGRIYWA LIGNHHAKQL FYVPIFSRRF
WGELLFELRW YFFLEKEPKK YVGHNPLAQL AMFLFMTVGL TFMIVTGFAL YAEGAGKDSM
FYAVFGWVQD LVQNTQRLHT LHHIGMWWIV IFMIIHIYVA IREDIMSRQS MVSTMISGHR
TFKDDRPD
|
|---|
| |