Gene Pden_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3092 
Symbol 
ID4581656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp274853 
End bp276391 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content66% 
IMG OID639770416 
Producthypothetical protein 
Protein accessionYP_916869 
Protein GI119385814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGTCGT GGGCGGAAAG GATGGTCCGC ACGAATCAGA ACGCAGGTTC CGGTCTTTCG 
ACAGCGCTGC TAAGGTCCGC GAAAAGAAAC GGAATCCCGA TGGCATCGAA ATCCACCCTC
AATGCAAAGA ACCTGGAGAC GCTCGGCGCT GAGCGTCTGG CGCAGCTGCT GATCGAGATC
AGCACCGGCG ATGCCGCAGC CAAGCGCCAG CTGCGGCTGG CTCTCGCCGG GGCGGAAGGG
CCGAGGGAAG CGGCGCGGGA GATCACCAAG CGGCTGACCA GCATCGCGAA GGCCCGGACC
TTCGTGAACT GGCAGAACCG CAAGCCGCTG GTGAAGGATC TTCAGACCCA GCGTAGCGCC
ATCATGGAAC AGATCGCCCC GCATGATCCG GGTGAGGCGC TGGCGCTTCT GTGGCGGTTC
ATGGGACTGG CCACGCCGGT GTTCGAACGC TGCGACGACA GCAGCGGCAC CGTCATCGAC
ATCTTCCATC AGGCCTGCGC CGATCTGGGC GAGGTGGCGA AGGCGGCGGG TGCGGCGCCG
GAGGCGCTGG CGCGGCAGGT TCTCGACGCG CTGCAGGACA ACGGCTTTGG TCAGTATGAT
GGTTTGATTG CCATGATTGC CCCGGCGCTG GGCCCCGAGG GCGTCGCGCA TCTGAAGACA
CTGGTCGAGG AACTCGGCCG CACGCCGGTG CCGGTGCCGC CAAAGAGCGA ATGGCAGGCT
GTCGGCTGGG GCAGCGGCGG CACGCGCTAC GCCCACGAGA TGGAGGAACG CGCGCGGCAG
AGTACGGTCG AGATGGCGCT GAAGGACATC GCCGACGTGC AGGGCGACGT CGATGGCTTC
ATCGCCCAGT ACGACCCGAA GACCCGCAAG GTGCCAAAGA TCGCGGCCGA GATCGCGCAG
CGCTTGCTGG CGGCGGGCAG GGCAGGGGAC GCGCTTGGTT TCATCGAGCG GGCTGAGGTG
GACAAGGCGC GCTGGATCCC GCCCGAGTGG CAGGACGCCC GACTTGCCGT GCTGGAGGCG
CTCGACCGGA AAGACGAGGC GCAGGCATTC CGCTGGGCGT GTTTCGAGCG CGACCTGTCG
GGCGAGCATC TGCGGGCCTA TCTGAAGCGT CTGCCGGATT TCGACGACAT CGAGGCCGAG
GAACGCGCGA TGGCGCATGC TGCTGGCCAT CCCGACCTGC TGGCTGCACT GGCCTTCTTT
CTGAATTGGC CATCGCTTGG CCACGCCGCG CGAATGCTGA TCGACCGGCA GGACGAGGTC
GACGGCGATC ACTACGAATT CCTCGCCCCG GCGGCAGAGA CATTGGCCGA GAAGCATCCG
CTCGCCGCGA CGGTGGCGCT TCGGGCGATG ATCGATTTCA CGCTGATCCA AGGGAGGCAG
AAGCGTTATG GCTATGCCGC CCAGCATTTG GCAACCTGTG CCGACCTGGC CGGACGGATC
GAGGACTTCG GACTGGTCGA GCCGCACCCT GCCTATGCCG CGCGCCTGAA GACCGAGCAT
GGCAAGAAGA CCGGCTTCTG GTCGCGGATG GACGGATGA
 
Protein sequence
MQSWAERMVR TNQNAGSGLS TALLRSAKRN GIPMASKSTL NAKNLETLGA ERLAQLLIEI 
STGDAAAKRQ LRLALAGAEG PREAAREITK RLTSIAKART FVNWQNRKPL VKDLQTQRSA
IMEQIAPHDP GEALALLWRF MGLATPVFER CDDSSGTVID IFHQACADLG EVAKAAGAAP
EALARQVLDA LQDNGFGQYD GLIAMIAPAL GPEGVAHLKT LVEELGRTPV PVPPKSEWQA
VGWGSGGTRY AHEMEERARQ STVEMALKDI ADVQGDVDGF IAQYDPKTRK VPKIAAEIAQ
RLLAAGRAGD ALGFIERAEV DKARWIPPEW QDARLAVLEA LDRKDEAQAF RWACFERDLS
GEHLRAYLKR LPDFDDIEAE ERAMAHAAGH PDLLAALAFF LNWPSLGHAA RMLIDRQDEV
DGDHYEFLAP AAETLAEKHP LAATVALRAM IDFTLIQGRQ KRYGYAAQHL ATCADLAGRI
EDFGLVEPHP AYAARLKTEH GKKTGFWSRM DG