Gene Pden_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3085 
Symbol 
ID4581649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp268564 
End bp268971 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content58% 
IMG OID639770409 
Producthypothetical protein 
Protein accessionYP_916862 
Protein GI119385807 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.174539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA TCGTCCTGGC AGCGATATTC TGCACGTTAT CCCTGTCTGC CGCGCAGGCG 
GATCAGTGCA TGGATAAGGC GGTGGACCAG GCTTCAATGA ACCGCTGCGC GGCGCAAGCC
TATGAGAAAT CCGACGCGGA TTTGAACAAG TATTTCCATG AAATCAGACA GCGACTGGCT
GATGACGTGG ACGCGCGGCA TCTTCTGCGC GATTCACAGC GCGCCTGGAT CACGTTTCGC
GATGCGGAAT GCGCCTTCGC CGCTTCGGCA ACAGCCGGTG GCAGCGCCTA TCCCATGGCG
CACGATCTGT GCCTGGCCGA CCTGACGCAG AAGCGCGCAT ATGAACTGCG ACAGTATCTG
GAATGCGAAG AGGGCGATAT GACCTGTCCC GTTCCGTTCG CCGATTAA
 
Protein sequence
MKHIVLAAIF CTLSLSAAQA DQCMDKAVDQ ASMNRCAAQA YEKSDADLNK YFHEIRQRLA 
DDVDARHLLR DSQRAWITFR DAECAFAASA TAGGSAYPMA HDLCLADLTQ KRAYELRQYL
ECEEGDMTCP VPFAD