Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3057 |
Symbol | |
ID | 4581621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 236773 |
End bp | 237651 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639770381 |
Product | inner-membrane translocator |
Protein accession | YP_916834 |
Protein GI | 119385779 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.299271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.394011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTC TTTTACAGAT TCTCGCCTCG GGCCTGACGC TGGGCGCGGT CTATGCGATT TCCACGGTTG GGCTGGCGCT GGTCTTCGGC GCGATGAATA TGCTGAATAT GAGCCATGGC GCGCTTATGG CTCTGGGCGG CTATATGGCC TGGTTCATGG TGACCGGTTT CGGCCTGCCG CCGGTTGCCG GAATGCTCGC GGCGGTGCTG GTCTGTGCGG CGGTGGGGGT GCTGATCTAT CTGCTGATCG CAAAGCCCAT GCTGCAGTCC GAGGGGTTCG AGACCCGCAT CTTCATCGCG ACCATCGGGT TTGGCGCCAT GCTGGAGAGC GTAATCCTGA TGGCCTTCGG GCCGCAGCCA AAGCCGCAAC CGTTAGCGGT GCAGGGCGGG TTCTCCCTCG CAGGGGTGCA TCTGCCGATC CAAAATCTGC TGATCCTTGT GCTGTCGATG CTGCTGATGG CCGCGCTGGC GCTGCTTTTG CAAAAGAGCC GGATCGGCAG GGCGATCCGC GCCACAGCGC AGAACCGTGA TGCCGCGCGG CTGATGGGGG TGCGGATTGG TGTGGTCTAT GCGCTGGTGC TGGGAATTTC CGGCGGGCTT GCCGCGATTT CCGGAATCAC CGTGTCATCG CTGTCCAGCC TCCTGCCGAA TATGGGGGGT GATCCGATGC TGAAAGCCTT CATCATCTGC GTGGTCGCCG GGCTTGGCAG GGTGCCTGGC AGTGTGATCG CTGCCCTGTT CATCGGTCTC TTCGAGGCAG TGGTGCAATA TACAATCGGG GTTCGCTTCA GCTTTGCGCT TTTGCTTCTT CTCGTCATCG TGGTGCTGAT CTGGAAGCCT CAGGGCGTGT TCGGGCGCCA ACAGGGGGTT CGTCTATGA
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Protein sequence | MDVLLQILAS GLTLGAVYAI STVGLALVFG AMNMLNMSHG ALMALGGYMA WFMVTGFGLP PVAGMLAAVL VCAAVGVLIY LLIAKPMLQS EGFETRIFIA TIGFGAMLES VILMAFGPQP KPQPLAVQGG FSLAGVHLPI QNLLILVLSM LLMAALALLL QKSRIGRAIR ATAQNRDAAR LMGVRIGVVY ALVLGISGGL AAISGITVSS LSSLLPNMGG DPMLKAFIIC VVAGLGRVPG SVIAALFIGL FEAVVQYTIG VRFSFALLLL LVIVVLIWKP QGVFGRQQGV RL
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