Gene Pden_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3021 
Symbol 
ID4581587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp199069 
End bp199446 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID639770347 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_916800 
Protein GI119385745 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.932135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACC GCCGTCCAAA ATCACCCAAC ATGCAGAACT ACCGGCCACA GCTGACCTCC 
GTCCTGTCGT TCGGGCACCG GCTTTCGGGC GTGGCGCAGA GCCTCGGCGC CCTCGGCCTC
GCAGCCTGGC TGATGGCCGG CGCCTCGGGC CAGGATGCGT TCGGAAGCGC GCAGGCGCTG
CTGCTGTCCG TGCCTGGCCG TATTGCGCTT TTTCTTGTAA CGCTGGCGCT GTTTTACCAC
CTTTGCAACG GCGTCCGGCA TCTGGTCTGG GACAGTGGCC GGGGCTTCGA ATTGCGCGCG
ATCTATGCCG GCGGATGGAC GGTGGTGGGG ACAAGCCTGA TCCTGACGCT GGCGTTGTGG
ACATGGGGGC TGGCATGA
 
Protein sequence
MSHRRPKSPN MQNYRPQLTS VLSFGHRLSG VAQSLGALGL AAWLMAGASG QDAFGSAQAL 
LLSVPGRIAL FLVTLALFYH LCNGVRHLVW DSGRGFELRA IYAGGWTVVG TSLILTLALW
TWGLA