| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3018 |
|---|
| Symbol | |
|---|
| ID | 4581584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 196070 |
|---|
| End bp | 197857 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639770344 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_916797 |
|---|
| Protein GI | 119385742 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC GCACCATCCC GGCCGGCCGC CCCGGCCCAA CCGCGATCCG CGAGACCTGG
CGCCAGTTGC AGGACAGCGT GGGCGAGGAC GCCCCGCGCT TGCGGGCTGC CATTCTTGGC
CTCTTGCTTG CCGCAGCGTT GCAGGGGCTG GCGCTGGCTG CCATCGCGCC GGTCCTTGTC
GCAGCCTTCG ACGGCAGGGA CTGGCCGGGC GCATTGCGCT GGCTGGGGAT CTGCACGATC
CTCATGGTCG CGGCGACCGC GGCAAGGTGG TGGGCGCAGG GCTTCGACTT CAACGGCCGC
ATGGCCGCGG CCACGCATCG TGTCCGGCTG CGGCTGGGCG AGCAGATGCG GCGCATGCCG
CTGGAAATGC TGCACGGCCA CCGCACCGGC GAGCTGAACT CGATGGTCAT CAACAACGTC
GATGAAAACC TTCTGACCAC GCTGACCATT CTCAACCTGA TCTTCATCTC GGTCGTCACG
CCGCTGGTGA CGGGGCTGGC GCTGCTGGTG CTGGACTGGC GCGCAGGGCT GCTGGTCCTG
GTGGTGTTTC CCGCCATCCT GCCCCTGTAT CGCTGGCGCC GGCCCGCGAT CGGGCGTGGC
AAGCGCATTC TGGGCGCCGC CCACCAGCAG GCGAATGCGG ATGTGCTGGA ATACACGCAG
GGCCTGCCCG TGCTGCGCGC CGCGTTGCAG GCCGGAGCGC GCGCCGGCAG GCTTGAACGG
ACGTTCCGCA AGCTGGAGGA GATCCAGATC TACGGGCATC GCAAGGGAGA AAAGCCGAAT
CTCATCGTCT CGACCGTTGT CGAGCTCGGG CTGGTCCTGA TGCTTGGGCT CGGCGTGGCC
TTCGTGGTCG CGGGAGAGAT GGATCTCGCG CTTCTCGCCG CGCTTCTGGT GATCGTGGTG
CGGCTGTCCG AGCCGCTGGC GACCTTCATT CTCTATACCG CGATCCTGGA ATTGATCGAG
GCAGCCTTGG ACCGGATCAA GGCGCTGCTT GCCATTTCAC CCCTGGATCA GGCATTGCCC
GCGCGAACGC CGGCACACTG CGGCATCAGA TTCGAAGCTG CCAGCTTTGC CTATGCAGGG
GCCGATGCCC CGGCCCTGCG CGATGTCGAT CTGACGATCC CCGAGGGCAG CCTGACCGCA
TTCGTCGGCC CCTCGGGATC GGGCAAGACC ACGCTGGCGC GACTGATCCT GCGCCATGCC
GATCCCCAGA AGGGCCGCAT CCTGATCGGC GGGGCGGATC TGCGCCAGAT CCCCGAAAGC
GCCCTGCGCG GGATGCTGTC CGTGGTGTTC CAGGACGTGC ATCTGTTCAA CGACACCGTC
ATGGCCAATA TCCGCATGGC CCGCCCGGAT GCGACCGAGG CCGAGGTCCG CGAGGCTGCC
CGTGCCGCGC AATGCCTCGA TTTCATCGAG CGGCTTCCGC TTGGCTGGAA TACGCCCCTG
GGCGAGATCG GCAGCCGCCT GTCAGGAGGG GAGCGTCAGC GCATCTCGAT CGCGCGCGCG
CTTTTGAAGG ACGCGCCGAT CCTGATCCTG GACGAGCCGA CTGCGGCACT GGATACCGAA
AGCGAACGTG CCGTTCAGCG CGCCATCGAT GCCGTCGTGC GCGACCGCAC GGTCATCGTG
ATCGCCCATC GGCTGTCGAC CATCGCCGGC GCGGATCAGA TCGCTGTCGT GGATGACGGG
CGCGTCGTCC AACTCGGCAC GCATTCCGCG CTGCTGGCGC GGCCGGGCCG CTACCGCGCG
ATGTGGGAGG CGCAGCTGGC GGCGAAGATC TGGTCGGGTC GGGCGTGA
|
|---|
| Protein sequence | MTGRTIPAGR PGPTAIRETW RQLQDSVGED APRLRAAILG LLLAAALQGL ALAAIAPVLV
AAFDGRDWPG ALRWLGICTI LMVAATAARW WAQGFDFNGR MAAATHRVRL RLGEQMRRMP
LEMLHGHRTG ELNSMVINNV DENLLTTLTI LNLIFISVVT PLVTGLALLV LDWRAGLLVL
VVFPAILPLY RWRRPAIGRG KRILGAAHQQ ANADVLEYTQ GLPVLRAALQ AGARAGRLER
TFRKLEEIQI YGHRKGEKPN LIVSTVVELG LVLMLGLGVA FVVAGEMDLA LLAALLVIVV
RLSEPLATFI LYTAILELIE AALDRIKALL AISPLDQALP ARTPAHCGIR FEAASFAYAG
ADAPALRDVD LTIPEGSLTA FVGPSGSGKT TLARLILRHA DPQKGRILIG GADLRQIPES
ALRGMLSVVF QDVHLFNDTV MANIRMARPD ATEAEVREAA RAAQCLDFIE RLPLGWNTPL
GEIGSRLSGG ERQRISIARA LLKDAPILIL DEPTAALDTE SERAVQRAID AVVRDRTVIV
IAHRLSTIAG ADQIAVVDDG RVVQLGTHSA LLARPGRYRA MWEAQLAAKI WSGRA
|
|---|
| |