Gene Pden_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3014 
Symbol 
ID4581580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp186830 
End bp188014 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content75% 
IMG OID639770340 
ProductNtaA/SnaA/SoxA family monooxygenase 
Protein accessionYP_916793 
Protein GI119385738 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.152708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.872356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGGC GCGGATGCTG CATATCGGTC TGGCCCTTGC CCGGACCTGG GGGCCGCCGC 
CGGCCCCGGA CCAGGCGCTG GCGCTGGATT GCGCGCTGGC GGTCCGGGCC GAGGCCGCGC
ATCGCGCGGG CGGCGCTGGA TCCGACGCTG GTGCTGACCG CCGTGGCCGG GGCGACGCGG
CGGATCGGGC TGGTCACGAC GGTCTCGACC AGTTTCAACC CGCCCTATGT CGCCGCGCGG
CAATTGCAGA CGCTGAACTG GCTCAGCAAC GGCCGGGCGG GCTGGAACAT CGTCACCGCG
CTGGATGGAG AGCGGAATTT CGGCCTTGCC GCCATGCCCT CGGCGGCCGA GCGTTACGCC
CGCGCGGCCG AGTTCACCGA TGTCGTGCGC CGCCTTTGGG ACAGCCACGG TGCCGAAGGG
CTGGCGGCCA TCGACCATTG CGGCGCCTTC TATCAGGTCG AGGGGCCGCT GAACGTGCCG
CGCCATCCCG CGCGCGTCGC GCTGTTCCAG GCCGGCGCCT CGGCCGAGGG CCGCGGCTTC
GCCGCCTCGG TCGCCGATGC GATCTTCGCC TCGGTCCCCG ACCCTGCCGC GGGGCAAGAG
CTGCGGTCGG ACCTGCAGCG CCGGGCCCGC GCCGCCGGCC GCGACGACGC GCCGCGGCTG
CTGCCGGGCT TTCACGCCTA TCTGGCGCCC AGCCGGAGCG AGGCGCAGGA GATGTTCCGC
GAGGCGCAGG CCCGCCGCGA TCCTGCCGCG CTGCGGGCCA AGCTGGGGGC GCTGGTCGGC
CGCGACCTGG GCGACTGGCC CGAGGACCGC CCCCTGACCC CCGCGGACCT GCCGGCCGGG
GACGCGGCGC TGCGCAGCCG CACCCATTCG GGGCTGCTGC AGCGGCTGAT CCGGCAGGAA
AGCCCGCCCC TGCGCGACCT GCTGCTGCGG CCCGAGGTGG CCAATTCCGG GCACTGGACT
TTCGTCGGCA CCCCGGCCGA GGCCCTGGCC GAGATCGCCG CCTGGTCGGA TGCCGGGGCC
ATGGACGGCT TCATCGCCCT GCCGGGCGGC AGCGGGGAAT CGCTGGACCT GCTGCTGTCC
GAACTGGTCC CGGCGCTGGC CGAGGCGCGG CGCTTTCGCC ACGCCTATGC CGGAGAGACG
CTGGCCGCGC ATCTGGGGCT TGCCTCGCCG GCGTCCAGCG GCTGA
 
Protein sequence
MRWRGCCISV WPLPGPGGRR RPRTRRWRWI ARWRSGPRPR IARAALDPTL VLTAVAGATR 
RIGLVTTVST SFNPPYVAAR QLQTLNWLSN GRAGWNIVTA LDGERNFGLA AMPSAAERYA
RAAEFTDVVR RLWDSHGAEG LAAIDHCGAF YQVEGPLNVP RHPARVALFQ AGASAEGRGF
AASVADAIFA SVPDPAAGQE LRSDLQRRAR AAGRDDAPRL LPGFHAYLAP SRSEAQEMFR
EAQARRDPAA LRAKLGALVG RDLGDWPEDR PLTPADLPAG DAALRSRTHS GLLQRLIRQE
SPPLRDLLLR PEVANSGHWT FVGTPAEALA EIAAWSDAGA MDGFIALPGG SGESLDLLLS
ELVPALAEAR RFRHAYAGET LAAHLGLASP ASSG