Gene Pden_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2996 
Symbol 
ID4581562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp170234 
End bp170545 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID639770322 
Productmethanol dehydrogenase, beta subunit 
Protein accessionYP_916775 
Protein GI119385720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0052543 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCCTGACCCT GACCGTTGCC GCCCTGGCGC TCGGCACTCC GGCGCTGGCC 
TATGACGGCA CCAACTGCAA GGCCCCCGGC AATTGCTGGG AGCCGAAGCC CGACTACCCG
GCAAAGGTCG AGGGCTCGAA ATACGACCCG CAGCACGACC CGGCCGAACT GTCCAAGCAG
GGCGAGTCGC TGGCCGTCAT GGATGCCCGC AATGAATGGC GGGTCTGGAA CATGAAAAAG
ACCGGCAAGT TCGAATATGA CGTCAAGAAG ATCGACGGCT ACGACGAGAC CAAGGCTCCG
CCCGCCGAAT AA
 
Protein sequence
MKRILTLTVA ALALGTPALA YDGTNCKAPG NCWEPKPDYP AKVEGSKYDP QHDPAELSKQ 
GESLAVMDAR NEWRVWNMKK TGKFEYDVKK IDGYDETKAP PAE