| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2888 |
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| Symbol | |
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| ID | 4581416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 54614 |
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| End bp | 55039 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639770215 |
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| Product | NlpC/P60 family phage cell wall peptidase |
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| Protein accession | YP_916668 |
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| Protein GI | 119385613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0230434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.227689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCGG TCGTCGTTCA GGCGGCGCGG GCCTGGATCG GCACGCCCTA TGTGCATCAG
GGCTCGGTCC GGGGGGCGGG GACGGATTGC CTGGGGCTGG TGCGCGGCAT CTGGCGCGAG
CTTTGCGGCG CCGAGCCCGA GGGGATGCCG GCCTATACGC CGGACTGGGG CGAGGTCGGC
GGGGCCGAGC TGCTGCTGGG CGGTGCGGAG CGGCAGCTGC TGCCCGCGCC GGACGAGCGG
CCGGGCGATG TGCTGGTCTT TCGCATGCGG GCCGGCGCGA TCGCCAAGCA TATGGGAATA
TTGGCGGAAA CCGGCGAGCG GGCGAGCTTT GTCCATGCCT ATGACCGGCA TGGCGTGGTC
GAAAGCCCGC TGTCGACGCC CTGGCGGGCG CGGATCGCGG GGCGGTTCCG GTTTCCGGCG
GCTTGA
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| Protein sequence | MSAVVVQAAR AWIGTPYVHQ GSVRGAGTDC LGLVRGIWRE LCGAEPEGMP AYTPDWGEVG
GAELLLGGAE RQLLPAPDER PGDVLVFRMR AGAIAKHMGI LAETGERASF VHAYDRHGVV
ESPLSTPWRA RIAGRFRFPA A
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