Gene Pden_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2847 
Symbol 
ID4581434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp14216 
End bp14827 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID639770174 
ProductTetR family transcriptional regulator 
Protein accessionYP_916627 
Protein GI119385572 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAT CCTCCTATCA CCATGGCAAC CTGCGCCAGG CCCTTGTCGA GGCCACGGTG 
CAACTGATCG AGGAAAGGGG CCCGCAGGCA TTCACCCTGG CCGAGGCCGC GCGCCTGGCC
GGAGTCAGCG CTGCCGCGCC CTATCGCCAT TTCGCCGGGC GCGAGGATCT GCTGGAAGAG
GTGGCCCGGC AGGGCTTCGA GGAATTCGCC GACCGGCTGG AAGCCGCCTT CGACGAGGGA
CGGCCGCGAC CACTGACCGC ATTCCTGCGC ATGGGGCAGG AATACCTGAC CTTTGCCGCC
GAACGGCGCG GCTTCTACAT GGCCATGTTC GAAGCCGGCC TGTCGATCGC CGGCAATGCC
GGGCTGTCGC AAGCCTCGGA ACGGGCGCGC GGCATCCTGG TGCGCGGAGC CGAGGCGCTG
TTCGCCCAAT TGCCCGCCGG CCGCCGGCCG CCGCCGGGCA TGGTGGCCGA CCACATCTGG
GCGCTGAGCC ATGGCGTGGT CGAACTGTTC GGTCGCGGCA AGCCCGGCTC GCGCTCGCCC
ATCTCGCCCG CCGACATGCT GGAAAGCGGC GCGCTGATCT ATCTGCGCGG GCTGGGCGTG
ATCCGCGACT GA
 
Protein sequence
MARSSYHHGN LRQALVEATV QLIEERGPQA FTLAEAARLA GVSAAAPYRH FAGREDLLEE 
VARQGFEEFA DRLEAAFDEG RPRPLTAFLR MGQEYLTFAA ERRGFYMAMF EAGLSIAGNA
GLSQASERAR GILVRGAEAL FAQLPAGRRP PPGMVADHIW ALSHGVVELF GRGKPGSRSP
ISPADMLESG ALIYLRGLGV IRD