Gene Pden_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2787 
Symbol 
ID4581366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2806485 
End bp2807093 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID639770113 
ProductSmr protein/MutS2 
Protein accessionYP_916567 
Protein GI119385511 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.106196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCC GGCGAGGACT CTCGGCCGAG GACAAGGCCC TGTGGTCCCG CGTCGCCGCA 
ACGGCCGTGC CGCTGCACCC GGCACGCAAG CAGGCCGAAC CTGCGCCCGA GCCCAGACCG
CTGAAAAAGC CGCCCGCCAT GCCGCCCGCC ATGCCGCAAG TCGCACCCCT GCCGCTGGCC
GGGCTGCGGA TCGGCGGCAA GCCCGGCGCC GGCACGACCC GTCTCGACCT GTCGCCGGCC
CCGCGCGAGG CGCTGCACGC CCAGCCCTTG CGCATGGATC ACAAGACCCA TCGCCAGATG
AGCCGCGGCA AGCTCGCGCC CGAGGCTCGG ATCGACCTGC ACGGCATGAC GCTGGCCGTT
GCCCAGCCGG TGCTGACCCG CTTCATCCTG CAGGCCCGGG CCGAGGGACG GAGGCTGGTC
CTGGTCATCA CCGGCAAGGG GCGCGAGGGC GGGCCGGACG CGCCGCTGCC GGTCAGGCCC
GGCGCGCTGC GCCACAACGT GCCGCATTGG CTGCACATGC CGCCACTGAA TGCCATGGTG
CTGCAAGTCC GCCCCGCGCA TCGCCGCCAT GGCGGCGAGG GCGCATATTA CGTCTATCTG
CGGCGCTAG
 
Protein sequence
MARRRGLSAE DKALWSRVAA TAVPLHPARK QAEPAPEPRP LKKPPAMPPA MPQVAPLPLA 
GLRIGGKPGA GTTRLDLSPA PREALHAQPL RMDHKTHRQM SRGKLAPEAR IDLHGMTLAV
AQPVLTRFIL QARAEGRRLV LVITGKGREG GPDAPLPVRP GALRHNVPHW LHMPPLNAMV
LQVRPAHRRH GGEGAYYVYL RR