Gene Pden_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2746 
Symbol 
ID4580381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2764956 
End bp2766530 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content66% 
IMG OID639770072 
ProductABC transporter related 
Protein accessionYP_916526 
Protein GI119385470 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.565066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA TTCTGGAAAT GCGGGGGATC ACCAAGGAAT TCCCCGGCGT GAAGGCCCTC 
GACAATGTCA ACATGGCCGT CCGGCGCGGC GAGATCCGCG CACTGGTCGG CGAGAACGGC
GCCGGGAAAT CCACGCTGAT GAAGGTGCTG TCGGGCGTCT ATCCGCATGG CAGCTATCAG
GGCGAGATCC TCTATGACGG CCGGCCCGTG GCCAATCGCT CGATCAGGGA CAGCGAGGAA
CAGGGCATCG TCATCATCCA CCAGGAACTG GCGCTGGTGC CGCAGATGTC CATTGCCGAG
AACATCTTCC TGGGCAACGA GATCGCGACG CGCGGCATCA TCGACCGGCG CGAGACCAAC
CGCCGCACCG CCGAGCTGCT GGCCCAGGTG GGCCTGCGCG AAAGCCCGGA AACCAAGGTC
GGCAGCCTGG GCATGGGCAA GCAGCAACTG ATCGAGATCG CCAAGGCGCT GTCGAAAAAG
GTCGACCTGC TGATCCTGGA CGAGCCGACC TCGTCCCTGA ACGAGAACGA CAGCGATGCG
CTGCTGCGCC TGCTTGCCGG ATTTCGCGAC CGGGGCATGA CGGCGATCCT GATCTCGCAC
AAGCTCAACG AGATCAGCCA GGTCTGCGAC AGCATCACCG TGCTGCGCGA CGGCGCGACG
GTGGCGCATC ACGACGGCAT GGTCGAGGAA TCGCGCATCA TCCGCGACAT GGTCGGCCGC
TCGATGAGCG ACCGCTATCC GTCGCGCCAG CCGAAGGTCG GCGAGGTGGT GATGCAGGTG
CGCGACTGGA CCGTCGCCGA TCCGGCGCGC GACGGCCGCC TGCTGGTCAA GGGCGCCGGC
TTCGACCTGC GGCGCGGCGA GGTTCTGGGC ATCGCCGGCC TGATGGGGGC TGGCCGCACC
GAACTGGCGA TGAGCCTGTT CGGCCGCTCG ATGGGCGATT GGAAATCCGG CTCGGTCACG
CTGCACGGCA AGCCGGCCGA CCTGTCCACC GTGCCGCGCG CGATCCGCGC CGGCCTTGCC
TATGTGACCG AGGACCGCAA GTCGCTGGGC CTGGTGCTGG ACGACACGAT CCGCCGCAAC
ATCCCGCTGG CGAACCTTGC CGGCATCTCG ACCCGCGGCG TGGTGGACCG CCAGCGCGAG
GGGGCGGTGG CGCGCGACTA TCGCCAGCGG ATCAACATCC GCTCGCCCTC GGTCGAAAGC
CGCACGATGA ACCTGTCGGG CGGCAACCAG CAAAAGGTGG TGCTGGCGAA ATGGCTGTTC
GCCGAGCCCG AAATCCTGAT CCTGGACGAA CCGACGCGCG GCATCGACGT GGGCGCGAAA
TACGAGATCT ACACCATCAT CCGCGATCTG GCCGCCGCCG GAAAGTCGAT CATCGTCATC
TCGTCGGAAA TGCCCGAGCT TCTGGGCATC ACCGACCGCA TCCTGGTGAT GAACGAGGGC
CGGCTGGTCG GCGAGATGCC GACGGCCGAG GCGACGCAGG AACGCATCAT GCAGGTCATC
ATCCGCTCGG GCCACGACCT GACCGACGAA ACCGTCACCC CCGAGGAAAT CGAGGCAGAG
GCCGCCCATG TCTGA
 
Protein sequence
MDAILEMRGI TKEFPGVKAL DNVNMAVRRG EIRALVGENG AGKSTLMKVL SGVYPHGSYQ 
GEILYDGRPV ANRSIRDSEE QGIVIIHQEL ALVPQMSIAE NIFLGNEIAT RGIIDRRETN
RRTAELLAQV GLRESPETKV GSLGMGKQQL IEIAKALSKK VDLLILDEPT SSLNENDSDA
LLRLLAGFRD RGMTAILISH KLNEISQVCD SITVLRDGAT VAHHDGMVEE SRIIRDMVGR
SMSDRYPSRQ PKVGEVVMQV RDWTVADPAR DGRLLVKGAG FDLRRGEVLG IAGLMGAGRT
ELAMSLFGRS MGDWKSGSVT LHGKPADLST VPRAIRAGLA YVTEDRKSLG LVLDDTIRRN
IPLANLAGIS TRGVVDRQRE GAVARDYRQR INIRSPSVES RTMNLSGGNQ QKVVLAKWLF
AEPEILILDE PTRGIDVGAK YEIYTIIRDL AAAGKSIIVI SSEMPELLGI TDRILVMNEG
RLVGEMPTAE ATQERIMQVI IRSGHDLTDE TVTPEEIEAE AAHV