| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2653 |
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| Symbol | |
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| ID | 4581198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2660610 |
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| End bp | 2661785 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769982 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_916436 |
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| Protein GI | 119385380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.399935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGG GCGGATGCAT CCGCGAGGTC ATGTCGTTCG GGATCTTTTC AGGAGCAGCG
AACTTGAGCA TCCGATCGGA AACGCACGAC AGGTCAGGCG ACCGGGCCGT CATGCCGCGC
CTGATGCCGC TGGTCCTGGC GCTGCTTTTC GCGACCCAGC CAGCCCTGGC CCAGCCCCCC
TTGCGTGTGG AGTTCGTACA GGTCGAGCAG ACCGAACTGA CCTTCGACGC CGCCCTGACC
GGAGCCGTCC ATGCCAAGGA CAGCGTCGAT ATCGGCTTCC GGCTGGGGGG ACGCGTCACC
GAAGTCCTGG TGCGCGAGGG CGACCGCGTC ACCCGGGGAC AGGCGCTGGC CCGGACCGAT
CCGCTGCAAC AGGAACAGGC GCTGCGCGTG GCCCAGGCCG CCGTGGCCTC GGCCGAGGCG
GCCGAGGCGC AGGCCAGCCA GGCGCTTCAG CGCGCCGATG CGATGCTCAG CCGCGGCGTG
GGCACGCGCG CGGCGCTCGA CGCCGCAAGC CAGGCCCTGT CGGCCGCCAG CGGCGGGCTG
ACACAGGCGC GCTCTGCCCT GGGCCAGGCC CAACGTGCGC TGGAGGATAC CGTGATCCGC
GCACCCGCCG ACGCCATCGT CACCGCACGC CGGGCCGAGC CGGGACAGAT CGTAGGGGCG
GCGCAGGCAG TGATCTCGCT GGCTTCCGCG ACGGGGCGCG AGGCGGTGTT CCAGACCTCG
GATACGCCGT TGCTGCGGGA TGCGATCGGT GCGCCGGTCA CTCTCAGGGG GATCGATTTC
CCCGATCTTC ACATGACCGC GCATGTGACG GAGATCGCGC CCCTGGTCGA TCCCGCCACG
GGCTCGGTCA CGGTGCGGGC CGAGATCGAC AATGCCCCGC CGGCCGCCAG CCTCCTGGGT
GCGGCAGTGC GGGGGGCGGT GCATTTCCCG GCCGGCAGCG GCATCGCCGT GCCCTGGACG
GCGCTGACCT CGGCGGACGG CAAGCCGGCG GTCTGGCTGG TGGGCAACGA CAATCGCGTT
TCGCTGGCAT CGGTCCAGAT CGAGCGATTC GCCAACGGCA CGGTGATCCT CAGCGGAGGG
ATCGAGCCCG GGCAGACGGT GGTCGGCGCG GGGTCGCAGA TGCTCTATCC CGGCCGCGAG
GTCACGAACG CGTCCCCATC GGCGAGGCAG GAATGA
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| Protein sequence | MSRGGCIREV MSFGIFSGAA NLSIRSETHD RSGDRAVMPR LMPLVLALLF ATQPALAQPP
LRVEFVQVEQ TELTFDAALT GAVHAKDSVD IGFRLGGRVT EVLVREGDRV TRGQALARTD
PLQQEQALRV AQAAVASAEA AEAQASQALQ RADAMLSRGV GTRAALDAAS QALSAASGGL
TQARSALGQA QRALEDTVIR APADAIVTAR RAEPGQIVGA AQAVISLASA TGREAVFQTS
DTPLLRDAIG APVTLRGIDF PDLHMTAHVT EIAPLVDPAT GSVTVRAEID NAPPAASLLG
AAVRGAVHFP AGSGIAVPWT ALTSADGKPA VWLVGNDNRV SLASVQIERF ANGTVILSGG
IEPGQTVVGA GSQMLYPGRE VTNASPSARQ E
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