| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2460 |
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| Symbol | |
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| ID | 4580793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2470943 |
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| End bp | 2472706 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769789 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_916243 |
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| Protein GI | 119385187 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.118018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.349655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACTCG CAAGACGCGG CATCCGCCTG CCACGCCCAA CCGCCCCCGC AGCCCTGATA
ACGGCGCTTG CCGCCCTGGC CCTGCTGGCC CTGCCCACCG GGCCGGCGCG GACCCAGACC
GCAGGCCAGA TCACCCAGGA CAGCTATCAG CCGCCGATGC AGCGCCTGTC GGGTTCGGTC
GTGTTCAGCG GCTCGCCGGG GCTGGCCGCA CCCCCGGGCG CGGATCGGCT GTCGATCCGG
CTGGCCGATG TCCGGGTCGA GGGCGCTCTG CCCGGCAGCG AGGCCGAGGT CGCAGCGCTG
CGCCAGCGCC TGACCGGCAA GCGGATCGCG GTCTCCGAGA TCTTCGCCGC CGCCTCGGAC
CTGGAGGCCG CCTATGTCCG CAACGGCTAT GTGCTGTCGC GCGTGGTCAT CCCCGCCCAG
ACGCTGGAGG ATGGCGGCGC GCTGCGCCTG ACCGTGGTCA GCGGCTTTGT CGAGAGGATC
GATTCCAGCG CCGCGCCGCC CGGCCTGCGC GCCCGGCTGG ACGCCATGAC CGCGCCGCTG
GTCGACCGCC CGACGCTGCG GCTGCCCGAT ATCGAGCGAC GGCTGCTGCT GGCCGGCGAC
ATGTTCGGCG TCGCGCTGGG ATCGGCACTG TCCACCGGCG CCCGGCCCGG CGGGACGATC
ATCATCCTGA ACCCGCAGTT CCGCTCGGTC ACCGGCTTCG TCGGGCTGGA CAACAGCTTC
TCACGCGAAT TGGGGCGGTG GAACCTCAGC GCCGGGGTCG AGCTGAACAA CCAGCTCGGC
CGGGGCGAGG TGTTCTATCT GCGCGCCTCG GGCCATCCCA GGCTGGGCGA TGACGGCTAT
TTCAGCGACC GGCCGCAATT GCGCACCCTG GCCGGCGGCG CGGTGCTTCC GCTGGGCCAT
GACGGACTGA CCTTCGGCAT CGAGGCGGCC AGCTCCAGGA CCGGACCGGA CACGGGCGCG
GTGGCCACGG CCTCGGATTT CGACCGGCTG TCCTTCAGGC TGTTCTATCC GGTGGTGCGC
TCGGTCAAGC GCAACATCTC GGTCACGGCG GCGCTGGACC TGCAACGCGA CCGGCAGGAT
CTGGAAACCG GCGCCGGCGA TTTCGGGCTA TACAAGGACC GCACCCGCGT CCTGCGCCTG
ACCGGCGAGG GCAACTGGCA GCTTTCCGAC CAAAGCGCCC TGCGCATGGC GGCGGTGCTG
TCGCTCGGGC TGGACGCCCT GGGCGCGCGC AGCGCTGCCG AAGCGACGCC GGCCCTGCCG
CTGTCGCGCG ACGGCGCAGA CGCGGATTTC CGCAAGCTCG AGCTGTCCTT TCGCTATGAC
CGCGATTTTC GCCAGGACTG GAGCCTGGCG CTGTCGGGGC AGGCGCAAAG CGCGTTCGGC
GACCCGCTTC TGTCCAGCGA GCAGTTCGGC ATCGCCTCGA CCGAGGGGCT GTCGGCCTTT
GACCTGGGCA GCCTGTCGGG CGATTCCGGC TGGTTCCTGC GCGGCGAGGT GGCGCGACAC
TTTCCGACGC AGGGCTTCGG CCGCCCGCTG GTGGTCAGCC CCTATGTCTT TGCCGCGGTG
GGCGCGGTCA ATCTGGAAAA CCCCTCGGCC GACGAGGCGG CCCGCATCAA GGCCACCTCC
TTCGGCATCG GCGTCGATCT GCGGCTGATC CGCGACCCCA GCTATTCCTC GGCGCTCATC
AGGTTCGAAT ACGGCAAAGG GAACAGGGAC GATGGACAGG AAGATCCCTC GCGTTTCACG
ATCGTCAGTT CGTATCGCTT CTAG
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| Protein sequence | MTLARRGIRL PRPTAPAALI TALAALALLA LPTGPARTQT AGQITQDSYQ PPMQRLSGSV
VFSGSPGLAA PPGADRLSIR LADVRVEGAL PGSEAEVAAL RQRLTGKRIA VSEIFAAASD
LEAAYVRNGY VLSRVVIPAQ TLEDGGALRL TVVSGFVERI DSSAAPPGLR ARLDAMTAPL
VDRPTLRLPD IERRLLLAGD MFGVALGSAL STGARPGGTI IILNPQFRSV TGFVGLDNSF
SRELGRWNLS AGVELNNQLG RGEVFYLRAS GHPRLGDDGY FSDRPQLRTL AGGAVLPLGH
DGLTFGIEAA SSRTGPDTGA VATASDFDRL SFRLFYPVVR SVKRNISVTA ALDLQRDRQD
LETGAGDFGL YKDRTRVLRL TGEGNWQLSD QSALRMAAVL SLGLDALGAR SAAEATPALP
LSRDGADADF RKLELSFRYD RDFRQDWSLA LSGQAQSAFG DPLLSSEQFG IASTEGLSAF
DLGSLSGDSG WFLRGEVARH FPTQGFGRPL VVSPYVFAAV GAVNLENPSA DEAARIKATS
FGIGVDLRLI RDPSYSSALI RFEYGKGNRD DGQEDPSRFT IVSSYRF
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