Gene Pden_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2393 
Symbol 
ID4579248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2389473 
End bp2390873 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content73% 
IMG OID639769722 
Product6-phosphogluconate dehydrogenase 
Protein accessionYP_916177 
Protein GI119385121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0362] 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.714231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG CGAAAATCGG CCTTATCGGC CTTGGGACGA TGGGTGCGGC GCTGGCGCTG 
AACATTGCCG AGAAGGGCTT TCCGATCGCG GTGTGGAACC GCACGACCGA GGTCACGCGC
CGCTTCCACG CCCAGGCGGG CGCCCTGGCG GACCGCGTGG TCCCGACCGA GAGCCTGGCC
GAGCTGGTGG CCGCCATCGC GCCGCCGCGC GCCATCGTCC TGATGGTCCC CGCCGGCCCG
GCCGTCGACG ACCAGATCGC GGCGCTGGCC CCGCTGCTCG GGCCCGAGGA CCTGGTGATC
GACGCCGGCA ACGCCAATTT CCACGACACC GACCGCCGCG CGGCGGCCGG CCTGCCGATG
CGCTTTCTGG GCATGGGCGT CTCGGGCGGC GAAGAGGGCG CGCGCCACGG CCCCGCCATC
ATGGGCGGCG GGGCGCGGGC CGACTGGGAC CGCATCGCCC CGGTCATGGA GGCCATCGCC
GCCCGGGCCG AGGACGGCAC CCCCTGCGCC GCCTGGATGG GCGAGGCCGG CGCCGGCCAT
TTCGTCAAGA CCGTGCATAA CGGCATCGAA TATGCCGACA TGCAGATGAT CGCCGAGGTC
TACGGGCTGA TGCGCGACGG GCTGGGCATG CCGGCCGCCG CCATCGGCGA GACCTTCGCG
GCCTGGAACC GGGGGACGCT GAAATCCTAC CTGGTCGAGA TCTCGGCCGC CGTCGCCGCG
GCCTCCGACC CGCTGACCGG GGCGCCGATG CTGGACGTGA TCCTGGACGC CGCCGGGCAG
AAGGGCACCG GGCGCTGGAC CGCGATCGAG GCGCAGCACC TGGCGGCGCC GATCCCGGTG
ATCGAGGCGG CGGTGGCGGC GCGCAACGTT TCGGCCCGCC TGGACGAGCG CAGGGCGGGC
GAGGCGCGCT TCGGCGCCGG CCCGCAGGCG CTGGAGCTGG CGCTGCCCGA GCTGGAGGCG
GCGCTGATCG CCGGCAAGAT CCTGTGCTAT GCGCAGGGTT TCGCGATGAT CGAGGCTTCC
GGCCGGGCCT TTGGCTGGCG GCTGGACCTG CCGGGCATCG CGCGGGTGTG GCGTGCGGGC
TGCATCATCC GCTCGGCCAT GCTGAACGAC ATGGCGTCGG CGCTGGCCGA GGATCCGTCG
CGCAACCTGG TGCTGGCGCC CTTCTTCGCC GAGCGGCTGC AGGCAGCGAT CCCCGCGCTG
CGCCGGGTGG TGGCGCAGGG CGTGCTGCAC GGCCATGCGC TTCCGGCGCT GGGTGCCGGT
CTGGGCTGGT TCGACCTGAT GCGCACCGGG CGGGGGACAG CGAACATGAT CCAGGCGCAG
CGCGATTTCT TCGGCGCCCA CGGCTTCGAC CGCCTCGACG GCCAGGACAA CCACCATGGG
CCGTGGGCAA TGGCAGGCTG A
 
Protein sequence
MTKAKIGLIG LGTMGAALAL NIAEKGFPIA VWNRTTEVTR RFHAQAGALA DRVVPTESLA 
ELVAAIAPPR AIVLMVPAGP AVDDQIAALA PLLGPEDLVI DAGNANFHDT DRRAAAGLPM
RFLGMGVSGG EEGARHGPAI MGGGARADWD RIAPVMEAIA ARAEDGTPCA AWMGEAGAGH
FVKTVHNGIE YADMQMIAEV YGLMRDGLGM PAAAIGETFA AWNRGTLKSY LVEISAAVAA
ASDPLTGAPM LDVILDAAGQ KGTGRWTAIE AQHLAAPIPV IEAAVAARNV SARLDERRAG
EARFGAGPQA LELALPELEA ALIAGKILCY AQGFAMIEAS GRAFGWRLDL PGIARVWRAG
CIIRSAMLND MASALAEDPS RNLVLAPFFA ERLQAAIPAL RRVVAQGVLH GHALPALGAG
LGWFDLMRTG RGTANMIQAQ RDFFGAHGFD RLDGQDNHHG PWAMAG