Gene Pden_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2356 
Symbol 
ID4579213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2352936 
End bp2353718 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID639769686 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_916142 
Protein GI119385086 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGAAG CCCCCAAGCC CCCTTCGCTG CGACCCGGCC TGGTGCCGGG GGTGCTGTCG 
ATCCTTGCCA TGCTGCTGGT CTGGACGCTG GCCTCGCAAC TGACCGACCG GCCTCAGACC
CTGCCCGCGC CCTGGGAGGT CGCCGCCCGC ATCATGCGCC TGGGCGCCAG CGGAGAGTTA
TGGTTCAACG CCGGCATGAC GCTGTTCCGG GTCGTCGCCA GCTTTGCGCT GGCCATGGCG
GCGGGCATGG CGCTGGGGCT GTGGATGGGC CGCAGCCGCG GGGCCGACCA ATGGCTGAAC
CCGGGCCTCA TCATCCTGCT GAACGTGCCG GCGCTGGTAG TGATCGTGCT GTGCTATATC
TGGATCGGGC TGAACGAGAC CGCCGCCATC CTGGCCGTGG CGCTGAACAA GATCCCGGTG
GTCACGGTGA TGATCCGCGA GGGCACGCGG GCGCTGCGCC CCGACCTGGA CGACATGGCG
CGCGCCTTTC GCATGCGGCC CTGGGCGCGG CTGCGCCATG TCGTGCTGCC GCAACTGGCG
CCGCATGTCG CCGCCTCGGC CCGGGCCGGC ATCTCGCTGA TCTGGAAGAT CGTGCTGGTG
GTCGAGTTCC TGGGCCGCTC GAACGGCGTC GGCTTCAAGA TCCACCTGCT GTTTTCCAGT
TTCGACGTCG AGGGGGTGCT GGCCTGGGCG CTGGCCTTCG TCGCGGTCAT GCTGGCCATC
GACCTCATCC TGCTGCGGCC CTGGGAATCG CGCGCCAACC GCTGGAGGCA GGATGCGGCT
TGA
 
Protein sequence
MTEAPKPPSL RPGLVPGVLS ILAMLLVWTL ASQLTDRPQT LPAPWEVAAR IMRLGASGEL 
WFNAGMTLFR VVASFALAMA AGMALGLWMG RSRGADQWLN PGLIILLNVP ALVVIVLCYI
WIGLNETAAI LAVALNKIPV VTVMIREGTR ALRPDLDDMA RAFRMRPWAR LRHVVLPQLA
PHVAASARAG ISLIWKIVLV VEFLGRSNGV GFKIHLLFSS FDVEGVLAWA LAFVAVMLAI
DLILLRPWES RANRWRQDAA