| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2337 |
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| Symbol | |
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| ID | 4579390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2334066 |
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| End bp | 2334782 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769667 |
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| Product | rhomboid family protein |
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| Protein accession | YP_916124 |
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| Protein GI | 119385068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.218198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGA TCCGCGACCA CAATCCCTCC GAGCGCACGC CCTATGTCAC CCATGCGCTG
ATCGTGCTGA ACGTGGCGAT GTTCCTGATC ACCATGCCCT GGGCGGGCGG GCAGGTCGAG
TTGTGGCACC GGCTGGCGCT TTATCCCGTG GCCGTCGCGC ATGGCGACTG GCTGTGGGGG
TTGGCGACGC ATATGTTCCT GCATGCCGGG ATCCTGCATC TTGCCGGCAA CATGCTGTTC
CTGTGGGTCT TTGGCGACAA TCTGGAGGAC CAGATGGGCC GGCTCGGCTT TCTGGTCTTC
TACCTCGCCT GCGGGTTGGC GGCGGCGGCG GGCCAGTTCG CCACCGACCC GATGAGCGAC
ATCCCCATGG TCGGTGCCTC GGGCGCCATC GCCGGGGTGA TGGGCGGCTA TCTGTTGATG
TTTCCGCGTG CGCGCGTCGA CGTGATCGCC ATCATCTTCG TCATCATCCG CCGCTTTACC
ATGCCGGCCT GGGTGCTGCT GCTGGCCTGG TTCGGCATCC AGCTTTTGTC GAGCGCCATC
GTGGTCGATG ACGGCGTGGC CTATGTCGCC CATGCCGCCG GTTTCCTGGC CGGGGTCGTC
CTGGCTGTGC CGGTCTTTCT GCGCCGGGGC GGGCCGGGCT TCTGGTCGCG CACCCATGGC
CGGCCGCCGC ATGCACCGAC CTATGCCCCC TCGCGCGTCC CGCGGGTGCG GCGCTAG
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| Protein sequence | MFPIRDHNPS ERTPYVTHAL IVLNVAMFLI TMPWAGGQVE LWHRLALYPV AVAHGDWLWG
LATHMFLHAG ILHLAGNMLF LWVFGDNLED QMGRLGFLVF YLACGLAAAA GQFATDPMSD
IPMVGASGAI AGVMGGYLLM FPRARVDVIA IIFVIIRRFT MPAWVLLLAW FGIQLLSSAI
VVDDGVAYVA HAAGFLAGVV LAVPVFLRRG GPGFWSRTHG RPPHAPTYAP SRVPRVRR
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