Gene Pden_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2335 
Symbol 
ID4579388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2332349 
End bp2333365 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content75% 
IMG OID639769665 
ProductFAD dependent oxidoreductase 
Protein accessionYP_916122 
Protein GI119385066 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0387808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCG AAATCACGGT GGCGGGCGGC GGGATCTTCG GCCTTGCCTG CGCGTGGGAA 
TTGACGCGGC GCGGCCGGAA GGTGCGGCTG TTCGAGGCGG TGCGGATCGG CGCCGGCGCC
TCGGGCGGCC ATGTCGGCGC GCTGGCCCCG CACGCACCGG AAAACTGGAA CGCCAAGAAG
CAGGTGCAGA TGGACGCCCT GATCGCGGCA GCCGGCTGGT GGGCCGAGGT CGGGGCGGCG
GGGGGCGTCG ATCCCGGCTA TGCCCGCACC GGCCGCATCC AGCCCGTGCC CGAGGGTGCC
CAGGCGCGCA TGGCCGAGCG CGTCGAGGCC GCCCAGGCGC ATTGGCCGGC ATGGGCGGGG
ATGGAACTGA CCGATGCGCC GCTGGGGCCG CTGGTGCCGG CCTCGGCCTC GGGGCTCTGG
CTGGTGGATC GGCTGACCGC GCGGATCAGC CCGCGCCGCG CCGGTGCGGC GCTGGCGGCT
GCGATCCGCG CCCAAGGCGG CGAGATCGTC GAGGGGCAGG CCGCGCCCGA TACGCCCGCG
ATCTGGGCGA CCGGGGTGGC GGGGCTTGCG CCCTTCGGCG GCAATGGCAT CAAGGGCCAG
TCGGCGCTCC TGGCGATGGA CCTGCCCGAC GCGCCGCAGG CCTTTGCCGA CGGCCTGCAT
GTCGTGCCCC ATGCCGACGG GACGGTGGCC ATCGGCTCGA CCTCCGAGCG CGATGTGGCG
GATCTGGGCA CGGACGGCCA GTTGGAGGCG CTGATCGACA AGGCCCGCGC GCTTTGCCCG
GTGCTGCGGG ACGCGCCGGT GGTCGACCGC TGGGCCGGCA TCCGGCCGCG CGCCGCATCC
CGTGCGCCGC TGGTCGGCCC TTGGCCGGGA CGGCCCGGCC ATTACGTCGC CAACGGCGGC
TTCAAGATCG GCCTGGCGAT GGCGCCAGCC TGTGCCGGGA TGCTGGCCGA CCTGATCCTT
GAGGGCCGCG ATACCATCCC CCGGGACTTT CGCCCCGAAC TCAGGGCAGG GGGCTGA
 
Protein sequence
MASEITVAGG GIFGLACAWE LTRRGRKVRL FEAVRIGAGA SGGHVGALAP HAPENWNAKK 
QVQMDALIAA AGWWAEVGAA GGVDPGYART GRIQPVPEGA QARMAERVEA AQAHWPAWAG
MELTDAPLGP LVPASASGLW LVDRLTARIS PRRAGAALAA AIRAQGGEIV EGQAAPDTPA
IWATGVAGLA PFGGNGIKGQ SALLAMDLPD APQAFADGLH VVPHADGTVA IGSTSERDVA
DLGTDGQLEA LIDKARALCP VLRDAPVVDR WAGIRPRAAS RAPLVGPWPG RPGHYVANGG
FKIGLAMAPA CAGMLADLIL EGRDTIPRDF RPELRAGG