Gene Pden_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2297 
Symbol 
ID4579350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2294647 
End bp2295537 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID639769627 
Productnucleotidyl transferase 
Protein accessionYP_916084 
Protein GI119385028 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0260595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.298446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA AAGTCACCAA GGCCATCTTT CCCGTGGCTG GACTGGGCAC CCGCTTTCTA 
CCCGCCACCA AAAGCATTCC CAAGGAAATC ATGACCTTGG TGGATCGCCC GCTGATCCAA
TACGCCATCG ACGAGGCGCG CGCCGCGGGA ATCGAGGAAT TCATCTTCGT CACCTCGCGC
GGCAAGGGGG CGCTGGAGGA TTACTTCGAC CACGCCCACG AGCTGGAATC GAGCCTGAAG
AAATCCGGCA AGACCGAGCT TCTGGAGATC CTGCGCTCGA CCAACATGGA TTCGGGCGCC
ATCGCCTATG TCCGCCAGCA CAAGGCGCTT GGCCTCGGCC ATGCCGTCTG GTGCGCCCGT
CGCCTGGTGG GGGACGAGCC CTTTGCCGTC ATCCTGACCG ACGACGTCAT CATGGGCGAG
CCGCCCTGCC TTCAGCAGAT GGTCGAGGCC TATAACGAAA CCGGCGGCAG CATGGTCGCC
ACCATGGAAG TGCCGCTCGA CAAGACCAGG GCCTACGGCG TGCTGGACGT GGCCGAGGAC
ATGGGCGCCA TCGTCCGTGC CCGCGGCATG GTCGAGAAGC CCAAGGAGAA CCCGCCCTCG
AACCTGGCGG TGATCGGCCG CTATATCCTG GCCCCCTCGG TGCTGAACAA CCTCAATAAG
CTCAAGCAGG GCTCGGGCGG CGAGATCCAG CTGACCGACG CCATCGCCGA CGAGATCGCC
GAGGGTCGCG ACGTGTTCGG CCTGCGCTTC CGCGGCCAGC GGTTCGACTG CGGCTCCAAG
GCGGGCTTCC TGCAGGCGAC CGTGGCCTTC GGGCTGGCGC GCGACGATCT CAAGGACGAG
TTCGCGGACT ATCTTTCCGA CCTCCAGGCG ATGCGCAAGG CGGCGGAATA A
 
Protein sequence
MTRKVTKAIF PVAGLGTRFL PATKSIPKEI MTLVDRPLIQ YAIDEARAAG IEEFIFVTSR 
GKGALEDYFD HAHELESSLK KSGKTELLEI LRSTNMDSGA IAYVRQHKAL GLGHAVWCAR
RLVGDEPFAV ILTDDVIMGE PPCLQQMVEA YNETGGSMVA TMEVPLDKTR AYGVLDVAED
MGAIVRARGM VEKPKENPPS NLAVIGRYIL APSVLNNLNK LKQGSGGEIQ LTDAIADEIA
EGRDVFGLRF RGQRFDCGSK AGFLQATVAF GLARDDLKDE FADYLSDLQA MRKAAE