Gene Pden_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2256 
Symbol 
ID4579310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2257154 
End bp2257858 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID639769586 
Producthypothetical protein 
Protein accessionYP_916044 
Protein GI119384988 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.37928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0533483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAT TGGATGAGCT GAAAGCGCTG GGTGATGCCG GCAAGGCCGC GGAGATGGCG 
GCCTATCACA AGGCCCCGCG CGAGTATCTG GGCGTGGTGG TGCCGGTGAT CGACGATCTT
GCGCGCGGCT GGCGGGCCGA GTTGGACGTA CCGGGGCGGG TCGATCTGGC GGCGCGGCTT
TGGGACAGCG ACGTGCATGA GGCGCGAATC GCGGCGGCGA AGCTTTTGAC CCAGGCGCGC
ATCAGGCCCG ACGAGGCGGC ATGGAGGCTA ATCGCCGGAT GGGTGCCGCA ATTCGACACC
TGGGCGATTG CCGATCATGC CATGAAGGCG GGCGAGCGGC GGCTACTGGC CCAGCCCGCG
CGGCTGGACG AGGTCGAGCT TTGGCTGGAG CATCCCAGCC TATGGGTGCG GCGCGCGGCG
CTGGTCGGCA CGCTGCCCTG GACGCATATC CGCAATCCCA AACCCCAGGA TCTGGAGCGG
CGCGAGCGCG TGCTGTCCTG GCTGGTCCGG CTGGCCGATG ACCGCGAATG GTTCGTCCAG
AAGGCCATCG GCTGGTGGTT GCGCGAATTG TCCAAGCACG ACCCTCAGCG CGTGCGCGAC
TGGCTTGCGG CGGATGGAGC GCGGCTGAAG CCCTTTGCCC GGCGCGAGGC CGGGCGGTGG
CTGCCGGAAA GCCGGGACGG TTCCGGGGGC GGTCAGCTGC CATAG
 
Protein sequence
MRELDELKAL GDAGKAAEMA AYHKAPREYL GVVVPVIDDL ARGWRAELDV PGRVDLAARL 
WDSDVHEARI AAAKLLTQAR IRPDEAAWRL IAGWVPQFDT WAIADHAMKA GERRLLAQPA
RLDEVELWLE HPSLWVRRAA LVGTLPWTHI RNPKPQDLER RERVLSWLVR LADDREWFVQ
KAIGWWLREL SKHDPQRVRD WLAADGARLK PFARREAGRW LPESRDGSGG GQLP