| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2252 |
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| Symbol | uvrA |
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| ID | 4579306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2252129 |
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| End bp | 2255008 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769582 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_916040 |
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| Protein GI | 119384984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.174561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0315795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA AGTTCATCGA GGTTCGCGGC GCGCGCGAGC ACAATCTGAA AAACGTGGAC
ATGGACATTC CGCGCGACAA GCTGGTGGTG ATCACCGGCC TGTCGGGCTC GGGCAAGTCC
TCTCTGGCCT TCGACACCAT CTATGCCGAA GGGCAGAGGC GCTATGTCGA AAGCCTGTCC
GCCTATGCCC GGCAGTTCCT CGACATGATG GGCAAGCCGG ACGTGGACCA TATCTCGGGC
CTGTCGCCGG CGATCTCCAT CGAGCAGAAG ACCACCTCGA AGAACCCGCG CTCGACCGTC
GGCACGGTGA CCGAGATCTA CGATTACCTG CGGCTGTTGT TCGCCCGCGC CGGCACGCCC
TATTCGCCGG CGACCGGCCT GCCCATCGAG GCGCAGCAGG TGCAGGACAT GGTGGACCGG
GTGATGGAAA TGCCCGAGGG CACGCGCGCC TACCTGCTGG CGCCCATCGT CCGGGACCGC
AAGGGCGAAT ACAAGAAGGA ATTCCTTGAG CTGAGGAAGC AGGGCTTCCA GCGCGTCAAG
GTGAACGGCC AGTTCTACGA ACTGGACGAG CCGCCGACCC TGGACAAGAA GTTCCGCCAC
AATATCGACG TGGTGGTCGA CCGCATCGTC GTGCGCGAGG GCATGGAGAC GCGGCTGGCC
GACAGTTTCC GCACCGCGTT GGACCTGGCC GACGGCATCG CGTTGCTGGA GACCGCCGCG
GGCGGGGCCG GCGAGGAAAA TGGCGCGGCC GAGCCCGAGC GCATCACCTT CAGCGAGAAT
TTCGCCTGTC CGGTCAGCGG CTTCACCATC CCCGAAATCG AGCCGCGGCT GTTTTCGTTC
AACGCGCCCT TCGGTGCCTG CCCGGTCTGC GACGGGCTGG GGGTCGAGCT GTTCTTCGAC
GACCGCCTGG TGGTGCCCGA TTCGGCGCTG TCGGTGGCAC AGGGGGCCAT CGCGCCCTGG
GCCAAGTCGA AATCGGCCTA TCTGACCCAG ACCGTCAACG CGCTGGCCAG GTTCTATGGC
TTCGACAAGA AGACGCCGTG GAAGGACCTG CCGGAATCGG TGCGCGAAAT GTTCCTGCGC
GGCTCGGGCG AGGACGAGAT CCCGTTCCGC TTCGACGATG CCGGCCGCGT CTACGAGGTC
ACCCGCCAGT TCGAGGGCGT GATCCCGAAC ATGGAGCGGC GGCTGCGCGA AAGCGACTCG
GCCTGGGTGC GCGAGGAATT CGAGAAATAC CAGAACAACC GCCCCTGCGG CGCCTGCAAC
GGCTATCGGC TGAAGCCCGA GGCGCTGGCG GTCAGGATCG CCGGCAGCCA TATCGGCAAT
GTCACCGAAT TGTCGATCCG CGAGGCGCTG GCCTGGATCG AGGCGGCGCC CCGGCACCTG
ACCAAGCAGA AGAACGAGAT CGCCGCCGCC ATCCTCAAGG AAATCCGCGA AAGGCTGGGC
TTCCTGGTCA ATGTCGGGCT GGATTACCTG ACGCTTTCCC GCGCGGCGGG CACGCTTTCG
GGCGGCGAAA GCCAGCGTAT CCGGCTGGCC AGCCAGATCG GCTCGGGGCT GACCGGCGTG
CTTTACGTGC TGGACGAGCC CTCGATCGGG CTGCACCAGC GTGACAACGA CCGGCTGCTC
TCGACGCTCA AGGGGCTGCG CGACCAGGGC AATTCCGTGC TGGTGGTCGA ACATGACGAG
GATGCGATTC GCCATGCGGA CTATGTCTTC GACATCGGCC CGGGTGCGGG GGTGCATGGC
GGGCAGGTCG TGGCCCGGGG CACGCCGGCC GAAATCGCCG CCGATCCCTG CAGCCTGACC
GGACAGTATC TTTCGGGCGC GCGCGAGATC GCCGTGCCGC CGGAACGCCG CAAGGGCAAT
GGCAAGGCGG TCAAGGTGGT CGGCGCCACC GGCAACAACC TGAAGAACGT CACGGCCGAG
TTTCCCCTGG GCAAGTTCGT CTGCGTCACC GGCGTCTCGG GCGGCGGCAA ATCGACCCTG
ACCATCGAGA CGCTGTTCAA AACCGCCAGC CTGCGACTTA ATGGCGCACG CCAGACGCCT
GCACCCTGCG AGACGATCAG GGGGCTGGAA TTGCTGGACA AGGTGATCGA CATCGACCAG
CGCCCCATCG GCCGCACGCC GCGCTCGAAT CCGGCGACCT ATACCGGCGC CTTCACCCCC
ATCCGCGACT GGTTCGCCGG CCTGCCCGAG GCCAAGGCGC GCGGCTACAA GCCCGGCCGC
TTCAGCTTCA ACGTCAAGGG CGGCCGCTGC GAGGCCTGCC AGGGCGACGG CGTCATCAAG
ATCGAGATGC ATTTCCTGCC CGACGTCTAT GTCACCTGCG AGACCTGCAA GGGCAAGCGC
TACAACCGCG AGACGCTGGA GGTGACCTTC AAGGGCAAGT CCATCGCCGA CGTGCTGGAC
ATGACGGTCG AGGATGCGCA GGAATTCTTC AAGGCGGTGC CCTCGATCCG CGAAAAGATG
GATGCGCTGG TCGAGGTTGG GCTGGGCTAT ATCAAGGTCG GCCAGCAGGC CACGACGTTG
TCGGGCGGCG AGGCGCAGCG GGTGAAGCTT TCCAAGGAAC TGTCGCGCCG CGCCACCGGC
AAGACGCTGT ATATCCTGGA CGAACCGACG ACCGGGCTGC ATTTCGAGGA TGTGCGCAAG
CTGTTGGAAG TGCTGCATTC CCTGGTCGAC CAGGGCAACA CGGTCGTGGT GATCGAACAT
AACCTGGACG TCATCAAGAC CGCCGACTGG ATCATCGACA TCGGCCCCGA GGGGGGCGAC
GGCGGCGGCC GCATCGTCGC CACCGGCACG CCCGAACAGG TGGCCGAGGT GCCGGAAAGC
CATACCGGCC GCTATCTGGC GCCCATGCTC GACGCGGCGC GCAGCCGCGC TGCGGAATGA
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| Protein sequence | MEQKFIEVRG AREHNLKNVD MDIPRDKLVV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS
AYARQFLDMM GKPDVDHISG LSPAISIEQK TTSKNPRSTV GTVTEIYDYL RLLFARAGTP
YSPATGLPIE AQQVQDMVDR VMEMPEGTRA YLLAPIVRDR KGEYKKEFLE LRKQGFQRVK
VNGQFYELDE PPTLDKKFRH NIDVVVDRIV VREGMETRLA DSFRTALDLA DGIALLETAA
GGAGEENGAA EPERITFSEN FACPVSGFTI PEIEPRLFSF NAPFGACPVC DGLGVELFFD
DRLVVPDSAL SVAQGAIAPW AKSKSAYLTQ TVNALARFYG FDKKTPWKDL PESVREMFLR
GSGEDEIPFR FDDAGRVYEV TRQFEGVIPN MERRLRESDS AWVREEFEKY QNNRPCGACN
GYRLKPEALA VRIAGSHIGN VTELSIREAL AWIEAAPRHL TKQKNEIAAA ILKEIRERLG
FLVNVGLDYL TLSRAAGTLS GGESQRIRLA SQIGSGLTGV LYVLDEPSIG LHQRDNDRLL
STLKGLRDQG NSVLVVEHDE DAIRHADYVF DIGPGAGVHG GQVVARGTPA EIAADPCSLT
GQYLSGAREI AVPPERRKGN GKAVKVVGAT GNNLKNVTAE FPLGKFVCVT GVSGGGKSTL
TIETLFKTAS LRLNGARQTP APCETIRGLE LLDKVIDIDQ RPIGRTPRSN PATYTGAFTP
IRDWFAGLPE AKARGYKPGR FSFNVKGGRC EACQGDGVIK IEMHFLPDVY VTCETCKGKR
YNRETLEVTF KGKSIADVLD MTVEDAQEFF KAVPSIREKM DALVEVGLGY IKVGQQATTL
SGGEAQRVKL SKELSRRATG KTLYILDEPT TGLHFEDVRK LLEVLHSLVD QGNTVVVIEH
NLDVIKTADW IIDIGPEGGD GGGRIVATGT PEQVAEVPES HTGRYLAPML DAARSRAAE
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