Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2249 |
Symbol | |
ID | 4579303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2250693 |
End bp | 2251220 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769579 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_916037 |
Protein GI | 119384981 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0435349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.108188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGACCG GCCTGAACAC CGCAGGCGCC GACCGTGACC TCGCCACGGC CGAGCTGAAC CGAGAGTTGC AGGACAAGGG CTTCCTGCTG ACCACGACCG AGGACATCAT CAACTGGGCG CGCAACGGTT CGCTGCACTG GATGACCTTC GGCCTGGCCT GCTGCGCGGT CGAGATGATG CAGACCTCGA TGCCGCGCTA TGACCTGGAA CGCTTCGGGA CCGCGCCGCG CGCCTCGCCG CGGCAGTCGG ACCTGATGAT CGTCGCGGGC ACGCTGACCA ACAAGATGGC CCCGGCGCTG CGCAAGGTCT ATGACCAGAT GCCCGAGCCG CGCTATGTCA TCTCGATGGG CAGCTGCGCC AATGGCGGCG GCTACTATCA TTATTCCTAT TCGGTGGTGC GCGGCTGCGA CCGCATCGTG CCGGTGGACA TCTATGTCCC GGGCTGCCCG CCGACCGCCG AGGCGCTGCT CTACGGCATC CTGCAACTTC AGCGCCGCAT CCGGCGCACC GGCACGCTGG TGAGGTGA
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Protein sequence | MMTGLNTAGA DRDLATAELN RELQDKGFLL TTTEDIINWA RNGSLHWMTF GLACCAVEMM QTSMPRYDLE RFGTAPRASP RQSDLMIVAG TLTNKMAPAL RKVYDQMPEP RYVISMGSCA NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTAEALLYGI LQLQRRIRRT GTLVR
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