Gene Pden_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2249 
Symbol 
ID4579303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2250693 
End bp2251220 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID639769579 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_916037 
Protein GI119384981 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0435349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGACCG GCCTGAACAC CGCAGGCGCC GACCGTGACC TCGCCACGGC CGAGCTGAAC 
CGAGAGTTGC AGGACAAGGG CTTCCTGCTG ACCACGACCG AGGACATCAT CAACTGGGCG
CGCAACGGTT CGCTGCACTG GATGACCTTC GGCCTGGCCT GCTGCGCGGT CGAGATGATG
CAGACCTCGA TGCCGCGCTA TGACCTGGAA CGCTTCGGGA CCGCGCCGCG CGCCTCGCCG
CGGCAGTCGG ACCTGATGAT CGTCGCGGGC ACGCTGACCA ACAAGATGGC CCCGGCGCTG
CGCAAGGTCT ATGACCAGAT GCCCGAGCCG CGCTATGTCA TCTCGATGGG CAGCTGCGCC
AATGGCGGCG GCTACTATCA TTATTCCTAT TCGGTGGTGC GCGGCTGCGA CCGCATCGTG
CCGGTGGACA TCTATGTCCC GGGCTGCCCG CCGACCGCCG AGGCGCTGCT CTACGGCATC
CTGCAACTTC AGCGCCGCAT CCGGCGCACC GGCACGCTGG TGAGGTGA
 
Protein sequence
MMTGLNTAGA DRDLATAELN RELQDKGFLL TTTEDIINWA RNGSLHWMTF GLACCAVEMM 
QTSMPRYDLE RFGTAPRASP RQSDLMIVAG TLTNKMAPAL RKVYDQMPEP RYVISMGSCA
NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTAEALLYGI LQLQRRIRRT GTLVR