| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2225 |
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| Symbol | |
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| ID | 4579201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2226148 |
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| End bp | 2228052 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769555 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_916013 |
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| Protein GI | 119384957 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATATC GGGAGATCTA TTCCGCCTGG CAGGCAGATC CTGAGGGTTT CTGGATGCAG
GCGGCCGAGG CCATCGAATG GGAGCGCAAG CCCTCGAAGG CGCTGTTCGA CGACAAGGCC
CCGATCTACG AATGGTTCTC GGACGGGATG GTGAACACCT GCTGGAACGC GGTGGACCGC
CATGTGCTGG CCGGGCGCGG CGACCAGATC GCCATCCAGC ATGAAAGCCC GATCACGCTT
TCGACCAAGG GCATCACCTA CAAGCAGTTG CAGGACCGCG TCGCCTCGCT GGCCGGCGCG
CTGCGCATGC GCGGCGTCGA AAAGGGCGAC CGCGTCATCA TCTACATGCC GATGATCCCC
GAAGCGCTGG AGGCGATGCT GGCCTGTGCC CGCCTTGGCG CCATCCACTC GGTCGTCTTC
GGCGGTTTCG CCGCGAACGA ATTGGCGGTG CGCATCGACG ATTGCCAGCC CAAGGCGATC
ATCGCCGCCT CTTGCGGGCT GGAGCCGAAC CGGGTCGTGC ATTACAAGCC GCTGCTCGAC
GCCGCCATCG ACATGGCCGA GCACAAGCCC GAATTCTGCG TGATCTTCCA GCGCGAGCAG
GAGGTGGCGA AGCTGGTCGA GGGCCGCGAC TTCAACTGGC ACGGCTTCCA ATACGGCGTG
AAGCCCGCCG AATGCGTGCC GGTCGAAGGC AATCACCCGG CCTATATCCT TTACACCTCG
GGCACCACCG GGCAGCCCAA GGGCGTGGTG CGCCACACCG CCGGCCACTT GGTCGCGCTG
CAATGGTCGA TGACGAACAT CTACAACATC GCGGCCGGCG ACCGTTTCTG GGCCGCCTCG
GACGTGGGCT GGGTCGTCGG GCATTCCTAT ATCTGCTACG GGCCCCTGAT CGCCGGCGCG
ACCACCGTGG TCTTCGAGGG CAAGCCCGTG GGCACGCCGC ATCCGGGCGT GTTCTGGCGC
ATCATCCAGA ACCACCGCAT CAAGAGTTTC TTCACCGCGC CGACCGCGCT GCGCGCCATC
CGCCGCGAGG ACCCGGAGGG CGAGTGGATC AAGCGCTACA AGCTGCACGA CCTGCAGGCG
CTGTTCCTGG CCGGCGAGCG CGCCGACCCG GACACGGTGA AATGGGCGCA GGAGCATCTG
GGCGTGCCGG TGGTCGATCA CTGGTGGCAG ACCGAGACCG GCTGGGCCAT CGCCGCCAAT
CCCATCGGCA TCGAGACCCT GCCGACCAAG CTGGGCAGCC CCTCGGTCCC GATGCCCGGC
TATGACGTGC AGGTGCTGGA CGAGGCAGGC CATCCGGTGC CGGCAGGCAC GCTGGGCGCC
ATCGCGGTCA AGCTGCCTTT GCCGCCCGGC ACGCTGCCCG GGCTGTGGAA TGCGGAAAAC
CGCTTCCGCA AGTCCTATCT CGACCATTTC CCGGGCTATT ACGAGACCGG CGATGCGGGC
TATATCGACG AGGACGGCTA TCTTTACATC ATGGCGCGCA CCGACGACGT GATCAACGTC
GCCGGGCACC GGCTTTCGAC CGGAGCGATG GAGGAGGTGC TGGCCAGCCA TCCCGATGTG
GCGGAATGCG CGGTGATCGG CGTGGCGGAC AGTCTCAAGG GCCAGTCCCC GGTCGGGTTC
CTGTGCCTCA AGGCCGGGGC AAGCACGCCG CATGAGCGGG TGGTCGCGGA TGTGGTGCGA
ATGGTGCGCG ACAAGATCGG CCCGGTCGCA GCCTTCAAGT CGGCCTGCGT GGTGGACCGG
CTGCCCAAGA CCCGTTCGGG CAAGATCCTG CGCGCCACCA TGGCCAAGAT CGCCGATGGC
GAACCGTTCA AGACCCCCGC CACCATCGAC GACCCGGCGA TCCTGGACGA GATCCGCGAG
GCTCTGGCGG GGCTCGGCTA TCCCGAGGCC GCCAAGGCGA GCTAG
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| Protein sequence | MGYREIYSAW QADPEGFWMQ AAEAIEWERK PSKALFDDKA PIYEWFSDGM VNTCWNAVDR
HVLAGRGDQI AIQHESPITL STKGITYKQL QDRVASLAGA LRMRGVEKGD RVIIYMPMIP
EALEAMLACA RLGAIHSVVF GGFAANELAV RIDDCQPKAI IAASCGLEPN RVVHYKPLLD
AAIDMAEHKP EFCVIFQREQ EVAKLVEGRD FNWHGFQYGV KPAECVPVEG NHPAYILYTS
GTTGQPKGVV RHTAGHLVAL QWSMTNIYNI AAGDRFWAAS DVGWVVGHSY ICYGPLIAGA
TTVVFEGKPV GTPHPGVFWR IIQNHRIKSF FTAPTALRAI RREDPEGEWI KRYKLHDLQA
LFLAGERADP DTVKWAQEHL GVPVVDHWWQ TETGWAIAAN PIGIETLPTK LGSPSVPMPG
YDVQVLDEAG HPVPAGTLGA IAVKLPLPPG TLPGLWNAEN RFRKSYLDHF PGYYETGDAG
YIDEDGYLYI MARTDDVINV AGHRLSTGAM EEVLASHPDV AECAVIGVAD SLKGQSPVGF
LCLKAGASTP HERVVADVVR MVRDKIGPVA AFKSACVVDR LPKTRSGKIL RATMAKIADG
EPFKTPATID DPAILDEIRE ALAGLGYPEA AKAS
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