| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2152 |
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| Symbol | |
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| ID | 4579969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2152702 |
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| End bp | 2153784 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769482 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_915940 |
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| Protein GI | 119384884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.952962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.940122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC GCACGCTGAT ACTGACCTCT GCGCTGGTCA CCGTCGCGGC CGCCGCCCAG
GCGCAGGACA AGCAGGTCAA CCTGCTGTCC TGGGGCGGAG CCTATGGCAT GAGCCATGTC
GAGGCCTATG CCAAGCCCTT CGAGGCCAAG ACCGGGATGA AGGTCCAGGT CTCGGACGCC
GACAACCCCG CCACCCCGGT CAAGGCCCAG GTCGAGGCCG GCAACGTCTC GATCGACGTG
GCTTCGGTCG AATATGCCGA TGCCGTGCGG CTTTGCGACG AGGGACTGCT GGAAGAGATC
GACCCCGCGA TCCTGACCCC CGCCGCCGAC GGCACCGCCG CCGCCGATGA CTTCATCGAG
GGCGCGATCA CCGAATGCTT CGTCGGCACG GATGTCTATT CGATGATCCT GGCCTATGAC
GACAGCAAGT TCCCCGATGC CAAGCCCGCC GGCGCGGCGG ATTTCTTCGA CACGGCCAAG
TTCCCCGGCA AGCGCACCAT GCGCAAGGGC GCCAAGTTCA ACCTGGAATT CGCGCTGATG
GCCGATGGCG TGGCGCCCGG CCAGGTCTAC GAGGTGCTGG GCACGCCCGA GGGCGTGGAC
CAGGCATTCG CCAAGCTGGA CACCATCAAG AACGACGTGA TCTGGTGGGA GGCCGGTGCG
CAGCCGCCGC AGCTTCTGGC CGATGGCGAG GTGAGCATGG CCTTTGCCTT CAACGGCCGG
ATCTTCAACG CCGCCCAGCA GGAGGGCAAG CCCTTCAAGA TCGTCTGGGA CGGCCAGATC
TACGAGATGG AGGGCTGGGT CATGCCGAAA GGCGCGCCCA ACCCCGAGGC CGCCAAGGAG
TTCATCGCCT TCTCGACCGC GCCCGAGCAG CAGGCCCGCG CCGCCGAGTT CATCAGCTAT
GGCCCGCCGC GCACCTCTGC CGCCGCCCTG GTCGGCAATA TCGAAGGCAC CGACGTGCCG
ATGGGTCCGA ACCTGCCGAC CTTTGCCGAG AACCTGGAGA ACGCGCTGGC CTCGAACCTG
GACTTCTGGG TCGATCACGA CGCCGAGTTG CAGGAACGCT TCAACGCCTG GCTGGCGAAC
TGA
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| Protein sequence | MMKRTLILTS ALVTVAAAAQ AQDKQVNLLS WGGAYGMSHV EAYAKPFEAK TGMKVQVSDA
DNPATPVKAQ VEAGNVSIDV ASVEYADAVR LCDEGLLEEI DPAILTPAAD GTAAADDFIE
GAITECFVGT DVYSMILAYD DSKFPDAKPA GAADFFDTAK FPGKRTMRKG AKFNLEFALM
ADGVAPGQVY EVLGTPEGVD QAFAKLDTIK NDVIWWEAGA QPPQLLADGE VSMAFAFNGR
IFNAAQQEGK PFKIVWDGQI YEMEGWVMPK GAPNPEAAKE FIAFSTAPEQ QARAAEFISY
GPPRTSAAAL VGNIEGTDVP MGPNLPTFAE NLENALASNL DFWVDHDAEL QERFNAWLAN
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