| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2127 |
|---|
| Symbol | |
|---|
| ID | 4579924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2129108 |
|---|
| End bp | 2129785 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639769457 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_915915 |
|---|
| Protein GI | 119384859 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGC TCGAGAACCT GACCAAGCGC TATCGGCTCA AGGGCCGCGA GACGCTGGTG
GCGGACCGGC TGAACGCCGA GTTCCCCACC GGGGCCTCGG TGGCGCTGCT GGGCCGCAAC
GGCGCGGGCA AGTCGACGCT GCTCAGGATG ATCGCCGGCA CGGTCTCGCC CACGGCCGGG
CGGGTGCTGT CGGACGGCAC CATCTCCTGG CCGGTGGGCT TTGCCGGCAG CTTCCACCCC
GAGCTGACCG GGGCGCAGAA CGTGCGCTTC GTGGCGCGCA TCTACGGCGT GGATACCGAC
GAGCTGATCG ATTACGTCGA GGATTTCGCC GAGCTGGGCC AGCATTACCA CCAGCCCTTC
GGCAGCTATT CCTCGGGCAT GCGCTCGCGG CTGGCGATGG GCGCCAGCAT GGGCATCCAT
TTCGACACCT ATCTGGTCGA CGAGGTGACC AGCGTCGGCG ACGCCAATTT CCGCGCCAAG
TCGCAGCGCG TCTTTGCCGA GCGCATGGCC CGCTCCTCCG CCATCGTGGT CAGCCATTCC
ATGCCGATGA TCCGCAGGAT GTGCACCATG GGCGCCGTCC TGCACCACGG CCGCCTCACC
CTGTGCACCG ACCTCGAGGA GGCCATCAGA ATGCACGAGG AAATCCTCAG GGTCCCCCCG
GACACGCAGG ACGAGTGA
|
|---|
| Protein sequence | MIRLENLTKR YRLKGRETLV ADRLNAEFPT GASVALLGRN GAGKSTLLRM IAGTVSPTAG
RVLSDGTISW PVGFAGSFHP ELTGAQNVRF VARIYGVDTD ELIDYVEDFA ELGQHYHQPF
GSYSSGMRSR LAMGASMGIH FDTYLVDEVT SVGDANFRAK SQRVFAERMA RSSAIVVSHS
MPMIRRMCTM GAVLHHGRLT LCTDLEEAIR MHEEILRVPP DTQDE
|
|---|
| |