Gene Pden_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2106 
Symbol 
ID4579903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2109183 
End bp2110664 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content70% 
IMG OID639769436 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_915894 
Protein GI119384838 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.314279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGA CCCGATCCCA CACGGGCCTT GTCGCGCGCC TTTCACTGGC CGCGGCCGCC 
CTTGTCCTTC CGCTTTCGCC CGGCTGGGCG CAGGCCGCCC CTGCCACCCC GCCGGCCTCC
GGCACCGCCG CGCAGGTCGC GGCCCCGAAG CCCAAAGCGC TGAGCACGAT CAGCCCGGCC
GAGATCGAGG TGGCCGGCTA TGACGGCGGC GACCTGCCCG CCGGCCAGTC CGCGCTGACC
GCCAAGGTGC AGATCCTGCT GGACCGCGCC GGCATCTCGC CCGGCGTGGT GGACGGCTGG
CGCGGCGGGA TGAGCGAAAG CGCCATCATG GCCTTCCAGC GCCGCTCGGG CCTGCCGATG
ACCGGCCGCA TGGATCATGC GGTGTGGGAC TTGCTGCAGG GCTATGCCGC CGCGCCGCTG
ACCACGGCCT ATACCATCAC CGACGAGGAC ACGACCGGCC TGGTCGACCG CATCCCCTCG
GATTACGCCG AAAAGGCGGC GATGACCTCG CAGGGCTATA CCAGCGTGCT GGAAAAGCTG
GCCGAGCGTT TCCACATGGA CGAGAAATTC CTGGCCAAGA TGAACCCCGG CGCAGCCTTC
CGGCCCGGCG AGACGATCCA TGCCACCGTC CCCGCCAAGC CGATCCGCGC CACCGTCACC
CGCATCATCG TCGACAAGGA GACCCGCCGC GTCGCCGCCT ATGACGCCAA GGGCAACATG
GTCGCGGACT ATCCGGCCAC GGTCGGCTCG GCCGACACGC CCTCGCCGCA TGGCAATCAC
GTCGTGGATG CTGTGGCGCT GAACCCGACC TATACCTACA ACCCGCATCG CAACTTCAAG
CAGGGCCAGA ACGACCGGGT GCTGACCATA CCGCCGGGGC CGAACGGGCC GGTCGGCAAT
GTCTGGATCG ACCTGTCCGA GCCGACCTAC GGCATCCACG GAACCGCCAC GCCCTCGCAG
CTGTTCCTGA ACCAGTCGCA TGGCTGCGTG CGGCTGACGA ACTGGGATGC GTGGGAACTG
GCGCATATGG TCAAGCCCAA GGTCACGACG GTCGAATTCC TGCCCCCCGG GGTCAGGATC
GCCGATGTGA CCGGCGCCTC GCCCGTGGCG GCGGCGACGC AGACGGCAGC GGTCGCGGCC
ATCGCGGGCA CCCGCCCGCC GGCCCGCGGC GACCGGGTGC CGCCGGCCAT CGCCGCGGCC
ATCCCCGAGG TGCCGCCCGC GGTCGCTGAG ACGACGGCCA TTCCCACAGC CGCAACCGTC
GTCGAGGCCG CGACAGAAGC CGCCGCGGCC GTGGCCACGA CCGAGCCATT GGTCATCACC
CCCGAGGTGC CCGTTTCACA GGAACCGCTG GTCTCCGACA CGCAGCACCC CCTGCCGGTC
GAGGAAGAGC CGGAATATCC CTCGGACGTC ATGCTTCCCG AAAGCCTGCC GGGACAGGCG
CCGGGCAGCG TGACGCTTTA TCCGCAGGCC GGGCAGCCCT GA
 
Protein sequence
MPPTRSHTGL VARLSLAAAA LVLPLSPGWA QAAPATPPAS GTAAQVAAPK PKALSTISPA 
EIEVAGYDGG DLPAGQSALT AKVQILLDRA GISPGVVDGW RGGMSESAIM AFQRRSGLPM
TGRMDHAVWD LLQGYAAAPL TTAYTITDED TTGLVDRIPS DYAEKAAMTS QGYTSVLEKL
AERFHMDEKF LAKMNPGAAF RPGETIHATV PAKPIRATVT RIIVDKETRR VAAYDAKGNM
VADYPATVGS ADTPSPHGNH VVDAVALNPT YTYNPHRNFK QGQNDRVLTI PPGPNGPVGN
VWIDLSEPTY GIHGTATPSQ LFLNQSHGCV RLTNWDAWEL AHMVKPKVTT VEFLPPGVRI
ADVTGASPVA AATQTAAVAA IAGTRPPARG DRVPPAIAAA IPEVPPAVAE TTAIPTAATV
VEAATEAAAA VATTEPLVIT PEVPVSQEPL VSDTQHPLPV EEEPEYPSDV MLPESLPGQA
PGSVTLYPQA GQP