| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2025 |
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| Symbol | |
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| ID | 4580409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2032396 |
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| End bp | 2033223 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639769354 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_915813 |
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| Protein GI | 119384757 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.232162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ATATCGATTC GCGACTGGAA ATGGGCTCTC CGCTGGATTT CGCCGTCGAT
CGGCAGTCGC GGGTGACGAT GACCGCGGTT CGGGGCGCGG TATCGCGCGG CAACGCAGTG
CTGGCCTATC AGCCGGTGGT GCAGGCGGAT CGCCCCGACC ACGCCGCCTT CCACGAAGGA
CTGATCCGAA TCATCGACGA AACCGGGCGC ATCGTGCCGC TGCGCGACTT TCTGCCGCTG
GCCGAGACCA CCGAACTGGG CCGGCAGATC GACTGCCTTT CGCTGTCGCT GGGCCTGAAA
TCGCTGGCCG AGGAACCCTC GCTCAGGCTT TCGATCAACA TGTCGGCGCG TTCGATCGGC
TATCCGGCCT GGCTGCGCAT CCTGCGCGAA GGCATCGCCG CGGACGACAG CATCGCCGAG
CGGCTGATCC TGGAAATCAC CGAAAGCTCG GCCATGGGCA TGCCCGACCT GGTGGGACGA
TTCATGCAGG AGTTGCAGGC CCAGGGCGTC AGCTTCGCGC TGGACGACTT CGGCGCGGGC
TATACCTCGT TCCGCTATCT GCGCGATTTC TGCTTCGACA TGATCAAGAT CGACGGCCAG
TTCGTCCGCG ACATCGCCAC CCAGCGCGAC AACCAGGTGC TGGCGCGGGC CCTGCAATCC
ATCGCGCATC ATTTCGACAT GTTCACGGTG GCGGAATCGG TCGAGACGGC GGATGACGCC
GCGTTCCTGA TCGACATGGG AATCGACTGC CTGCAAGGCT ATTATTTCGG CGCGCCGACC
ATCATGCCGC CGTGGAAATC GCCCAGTTCG GCCGCCCGAC GCGGCTGA
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| Protein sequence | MTDNIDSRLE MGSPLDFAVD RQSRVTMTAV RGAVSRGNAV LAYQPVVQAD RPDHAAFHEG
LIRIIDETGR IVPLRDFLPL AETTELGRQI DCLSLSLGLK SLAEEPSLRL SINMSARSIG
YPAWLRILRE GIAADDSIAE RLILEITESS AMGMPDLVGR FMQELQAQGV SFALDDFGAG
YTSFRYLRDF CFDMIKIDGQ FVRDIATQRD NQVLARALQS IAHHFDMFTV AESVETADDA
AFLIDMGIDC LQGYYFGAPT IMPPWKSPSS AARRG
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