Gene Pden_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1898 
Symbol 
ID4581118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1898112 
End bp1898681 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID639769218 
Producttranscriptional regulator BetI 
Protein accessionYP_915689 
Protein GI119384633 
COG category 
COG ID 
TIGRFAM ID[TIGR03384] transcriptional repressor BetI 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.516786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC TTGGCGCTGA ACCTATCCGA AAAGCGGCGC TGATCAACGC CGCGATTGCC 
ACAGTGGGGC GGGCGGGCTC GCTGGATGTC ACCGTGGCGC AGATCGCGCG CGAGGCGGGC
ATGTCCTCGG CCCTGGCGCA TCACTATTTC GGCTCCAAGG AGCGGATCTT CCTGGCAGCC
ATGCGGCATA TCCTGACGCA ATACGGCACC TCGACCCGCA CGGCGCTGCG GGGGGCCGGG
ACGCCGCAGG ACCGGCTGCG CGCCATCGTC GGCGCCAGTT TCGACAGCGC GAACTTCGAG
CGCGAGACCA TCGCCGCCTG GCTGAACTTC TATGCCCTGG CGCTGGTCGA GCCCGAGGCG
GCGCGGCTTT TGCGCGTCTA TCACCGCCGG CTCTCCTCGA ACCTGCTGGT GGCGCTGCGC
CCCCTGGCGG GTGCCGGGGC CGAGCGGATC GCCCGCACGC TGGGGGCACT GATCGACGGG
CTTTACCTGC GCGCGGCGCT GTCCAACGAG GCCGATGCGG CCGCCGCCGA ACGCACGACG
CTGGATTATC TGGAGAAGGT GCTGCCATGA
 
Protein sequence
MPKLGAEPIR KAALINAAIA TVGRAGSLDV TVAQIAREAG MSSALAHHYF GSKERIFLAA 
MRHILTQYGT STRTALRGAG TPQDRLRAIV GASFDSANFE RETIAAWLNF YALALVEPEA
ARLLRVYHRR LSSNLLVALR PLAGAGAERI ARTLGALIDG LYLRAALSNE ADAAAAERTT
LDYLEKVLP