Gene Pden_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1869 
Symbol 
ID4579128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1867678 
End bp1868847 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID639769190 
Productsporulation domain-containing protein 
Protein accessionYP_915662 
Protein GI119384606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.646599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.945616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAG TAGATTTCCG CTCTTCGGGC GGGTTTGACG GGTCGCAGTC GCATGGGCTG 
TCGCAGGATT GTCCCCATGC CGACCGGCAG CAGGGCCATG TCGAGGACTG GCAGGACGAG
GGCTGGCAAG ACGGCGGCTG GGACGGGCAG CACTATCACG CCCATGCCGA GGCACTGGCC
GAATCGCCCT CGCTTCTGGG GCGGCTTACG CGGCTTACGC ATTACGTCGG GGCGCTGGTT
TCGGTCGGGC TGATCGTGAT CCTGGCCGTC TGGGGCTACA AGCTGGTGGT CCGCGACGTC
TCGGGCGTGC CGGTGATCCG CGCCATCGAG GGCGAGGCCC GCACCGCCCC CGACAATCCG
GGGGGCGAGT TGACCGACCG CACCGGCCTT GCCGTGAATT CGGTCGCCGC CGGGGCCGAA
TCCGCGGCCG TGGAACGCGT GGCCATCGCG CCGTCCGCTA CCCCGCTCGA GGGTCAGGAC
GTGGCCATGG GCGAATTGGG CGCCACCGCG CAAGAGCCTT CGCATCCGGT CGAAATGCCG
CTGATGGAGG AAACCGCCCG CGTCATCGCC CGTCCCGACG GCGAAACCCT GGCCGAGCCC
GATCCGGCTG CCGAATCCGT CGCCAATGCG GTGATCTCGG ATGCCCCGGC CGCCGATGCG
CCGGTGAACG AGGCGGTGAC CGACCTTGCC GGCAACGAGA CGCGCGACAT CGCCATCACC
ACCGCGCTGG CCGAGGCCGG CGTCGCGCCG ACCCCCGCCG GCATCGCGCA ATCGGCGCGT
CCCGCGCCGC GTCCGCGCCG TGTGGCCGCC GCCTCGGCGT CATCCGCGCC GGCGCCCGTG
GCTGCGCCTG CCGCCGCCGC CGAGAGCCGT CCCGCCGCCG CGCCCGAACC CGCTGCGCCC
GCTCCGGCGC AGGTCGCCTC GGGTGCGCCG CTGGTCCAGA TCGGCGCCTT TGACAGCGAT
GCGCTGGCGC GGGGCGAATG GAACCGCGTC TCGGGCAAGT TCGGCGCGCT TTTCGCCGGC
AAGGGCATGG TGGTCCAGGA GCACAAGGCC AATGGCCGCA CCTTCTGGCG CCTGCGCGCC
GCCGGCTTCG CCTCTCGCGA CGAGGCGCGC CGCTTCTGCG CGGCGCTGAT CGCCGAGGGC
GTGGACTGCA TCCCCGCCGC GGCGAAATGA
 
Protein sequence
MTVVDFRSSG GFDGSQSHGL SQDCPHADRQ QGHVEDWQDE GWQDGGWDGQ HYHAHAEALA 
ESPSLLGRLT RLTHYVGALV SVGLIVILAV WGYKLVVRDV SGVPVIRAIE GEARTAPDNP
GGELTDRTGL AVNSVAAGAE SAAVERVAIA PSATPLEGQD VAMGELGATA QEPSHPVEMP
LMEETARVIA RPDGETLAEP DPAAESVANA VISDAPAADA PVNEAVTDLA GNETRDIAIT
TALAEAGVAP TPAGIAQSAR PAPRPRRVAA ASASSAPAPV AAPAAAAESR PAAAPEPAAP
APAQVASGAP LVQIGAFDSD ALARGEWNRV SGKFGALFAG KGMVVQEHKA NGRTFWRLRA
AGFASRDEAR RFCAALIAEG VDCIPAAAK