Gene Pden_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1858 
Symbol 
ID4579117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1858734 
End bp1859552 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID639769178 
Producthypothetical protein 
Protein accessionYP_915651 
Protein GI119384595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.592545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTC CAGGAACCTG GATGACGGAA AGCGAAAGCA TGGTCTATCG CGTCGTCCCG 
AAATGCGCCT GCTCGTCCAT CGGGCAGATC ATGTTCTATT CCGACCACGG CCGCTACTTC
GACGGTGACA TCCACGATTC CACCGGCGGG CTGCACAAGT GGAACCAGCC CGACAGCCAG
CCGCTGATCG AAAGCAACGT CACGGCGCAC AAGGCGCTGA CCTTCACCTG CGTGCGCAAT
CCCTATGCGC GCATCCTGTC CTCGTTCTTC GACAAGATCG CCGGCATCCA GCGCAACGGC
AAGCGCTACC GCGGCAATCT CGTGCCGCAG TTGATGCAGC GCTACGGGGT CGATGTCGGC
AGTCCCGAAA ACGGCTTCGA ATTCGACCAG GTCGCCAGCT TCCGCCGCTT CCTGCTGTTT
GCCCGCGACA CGATCCGCTG GCGCCGCCCG ATGGAGCCTG ACATCCACTG GTCGGCCATG
TCGGGCCATA TCTCGACCTT CATCGCCAAC GGCGGCCGCT ACGACCAGAT CTTCTTTACC
GAGAAGTTCG ACGAAGGCAT GCAGAAGGTG CTGGACGCCG CGCCCACCCC GGTCAAGCTG
GACGTGAAGG ACGTGCCGAA GTTCAACGAA TCCGAAGGCC ACGGCCCCAA GCGCGCCCAC
AAGGTCAGCG CCTATTTCGA AGACCTGTCG CAGCATCTTG TCTGGGAAAT CTACAAGAAG
GATTTCCAAC TCTTCAGATA CGACTTCGAC GATCCCGACA ACAAGCTGCC CAAAGGCGAG
GTCGACCTGG ACGAAGTCCA CGCCAGGCTC GGGCGCTGA
 
Protein sequence
MGFPGTWMTE SESMVYRVVP KCACSSIGQI MFYSDHGRYF DGDIHDSTGG LHKWNQPDSQ 
PLIESNVTAH KALTFTCVRN PYARILSSFF DKIAGIQRNG KRYRGNLVPQ LMQRYGVDVG
SPENGFEFDQ VASFRRFLLF ARDTIRWRRP MEPDIHWSAM SGHISTFIAN GGRYDQIFFT
EKFDEGMQKV LDAAPTPVKL DVKDVPKFNE SEGHGPKRAH KVSAYFEDLS QHLVWEIYKK
DFQLFRYDFD DPDNKLPKGE VDLDEVHARL GR