| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1840 |
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| Symbol | |
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| ID | 4581024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1838518 |
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| End bp | 1839819 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769160 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_915633 |
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| Protein GI | 119384577 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.447547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA CCGCCCCGTT TTCGCGTTAC GAATTCATGA TCGCCTGGCG CTATCTGCGC
GCCCGCCGCG CCGAGGGCGG GGTCAGCGTG ATGACCTGGA TCAGCCTGAT CGGCATCACC
CTGGGCGTGA TGGCATTGGT CGCCACGCTG GCGGTGCGCG CCGGTTTCCG GGCCGAGTTC
GTCGACACCA TCCTGGGCGC CAATGCCCAT AGCACCGTCT ATTACGCGCC CACGCAGGTC
TATAACGAGC TGACCGAAGA GACCTATGTC ACCCAGGGCC GGATCGAGGA TTACGACGCG
CTGGCCGCCA GGATCGCGCA GATCCCCGGC GTGACCCGCG CCGTTCCGGC CGTTCGCGCC
CAGGTCATGG CGCGGCAGGG CGATGCGGCC GCCTTGGGCG ATGTGCATGG CATCACGCTC
GATGCGCTCG GGGGGATGGC GGGCATTGCC GATCCCGAGA GCGCGTCGGG CAGCCTGGAC
GATTTCGACC AAGGCATCGC CATCGGCATC GGCATGGCGC GCAACCTGGG CGTTCGGATC
GGCGACCGGC TGCAACTGGT CGCGCCCGAT GGTGCCAAGA CCCCCTTCGG CACCACGCCG
CGGGTCGAAT CCTTCGAGGT CGTCTATATC TTCTCGGCGG GACGCTATGA CGTGGACCAG
GCCCGCATCT ACATGCCGCT GGCCGAGGCG CAGAGCTTTT TCAACCGAGA GGGGCTTGCC
GACGAGATCG GGGTCTATGT CGCCGATCCC GAGCGGGTCG ACGACTGGAC CATGCCGCTC
TTGCAGGTCC TGGGCGAGCG GGGGCAGATC TGGACCTGGC GCGATGCTTC GGGATCGTTC
CTGGCCGCGC TCGACATGGA GGATGACGTG ATGTTCATCA TCCTGTCGAT CCTGGTGCTG
ATCGCCTCGA TGAACATTAC CTCGGGGCTG ATCATGCTGG TCAAGAACAA GGGTCGCGAC
ATCGGCATCC TGCGCACCAT GGGGCTGACC GAGGGCTCCG TCCTGCGGGT CTTTTTCCTC
TGCGGCGCCT TTACCGGGGT GATCGGCACC ATCGCCGGCG TGGTGCTGGG CGTGCTTCTG
TCGCTGAATG TCGATCACAT CATGGCGGCG CTGAACATGC TGACCGGCGG CAATGCCTGG
CAGCCCGAGG TGCGCGGCAT CTACCAGCTG ACTGCCGAAT TGCGGGGCTG GGACATCTTC
CGGGCGGCGG CGCTGTCGCT GGCCCTGTCC TTCATCGTCA CCATCTTCCC TGCGCGCCGC
GCTGCGCGCA TGAACCCGGT AGAGGCGCTG CGCTATGAGT GA
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| Protein sequence | MASTAPFSRY EFMIAWRYLR ARRAEGGVSV MTWISLIGIT LGVMALVATL AVRAGFRAEF
VDTILGANAH STVYYAPTQV YNELTEETYV TQGRIEDYDA LAARIAQIPG VTRAVPAVRA
QVMARQGDAA ALGDVHGITL DALGGMAGIA DPESASGSLD DFDQGIAIGI GMARNLGVRI
GDRLQLVAPD GAKTPFGTTP RVESFEVVYI FSAGRYDVDQ ARIYMPLAEA QSFFNREGLA
DEIGVYVADP ERVDDWTMPL LQVLGERGQI WTWRDASGSF LAALDMEDDV MFIILSILVL
IASMNITSGL IMLVKNKGRD IGILRTMGLT EGSVLRVFFL CGAFTGVIGT IAGVVLGVLL
SLNVDHIMAA LNMLTGGNAW QPEVRGIYQL TAELRGWDIF RAAALSLALS FIVTIFPARR
AARMNPVEAL RYE
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