| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1828 |
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| Symbol | |
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| ID | 4578540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1824601 |
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| End bp | 1827528 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769148 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_915621 |
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| Protein GI | 119384565 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.232638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.528087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACA GATCGCGGGT CACGGCCGTT CTCGGCCCGA CCAATACCGG CAAGACGCAT
TACGCCATCG ACCGGATGCT GGCGCATCGC ACGGGGGTCA TCGGCCTGCC GTTGCGCCTG
CTTGCGCGCG AGGTCTACGA CCGCATCGTC AAGGCGCGCG GCCCCTCGGT CGTGGCGCTG
GTCACCGGCG AGGAGCGGAT CGTGCCCGAG CGGGTGCAAT ACTGGGTCGC CACCACCGAG
GCCATGCCCG AGGTCGGCGC CGATTTCGTC GCCATAGACG AGATCCAGCT TTGCGCCGAC
CCCGAGCGCG GCCATGTCTT CACCGACCGG CTGCTGAACA TGCGGGGCCT GCACGAAACC
CTGCTGCTGG GCAGCGACAC CATGCGTCCC GCCATCGCCG CGCTGGTGCC TCAAGTGCAG
TTCATGCGGC GCGAAAGGTT TTCCACGCTG TCATGGGCGG GCTCGAAAAA GATCAGCCGC
ATGCCGCCGC GCTCGGCCAT CGTCTGCTTT TCGGTCGAGG AGGTCTATGC CACGGCCGAG
CTGATCCGCC GCCAGAAGGG CGGCTGCGCG GTGGTGATGG GCGCGCTGAG CCCGCGCACC
CGCAACGCGC AGGTCGCCAT GTATCAGCAG GGCGAGGTGG ATTACCTGGT CGCCACCGAT
GCGATCGGGA TGGGGCTGAA CCTCGACATC CGCCATGTCG CCTTTTCCGC CACCGAGAAG
TTTGACGGCC GCCGCTATCG CCCGCTGTTC CCCCATGAGC TGGGCCAGAT CGCCGGGCGG
GCCGGGCGGC ATACCGAGCC GGGCACGTTC GGCGTCACCG GCGATGCCGG CCCGCTGGAG
GAGGGACTGA TCGAGGCCAT CGAGAACCAC CGCTTCCAGC CCATCAGCCG GCTGATGTGG
CGCAACGGCG CGCTGGAATT CGGCACGGTC GAGCGGCTGC TGCAAAGCCT GGAGACCCAG
CCGCAATCGG AATGGCTGGC GCGCGGGCGC GAGGCGGACG ACATGCGCGC GCTCAAGGCG
CTGTCCGCCA TGCCCGAGAT CCGCGACAGC ATGTCGCACC CCCGCGACGT GCGGCTTTTG
TGGGATGTCT GCCGGATCCC GGATTTCCGC GGTATCTCTC CGGTCGAGCA TGCGACGCTT
CTGGCGCGGA TATTCGGCTT TCTGCGCGAG GGCGGCGTGC CCCGGGACTG GCTGGCGGGG
CAGATCGCCC GGATTGATAA AACGCAAGGC GACATCGACA CATTGTCGAA ACGATTGGCA
TATATACGGA CCTGGACCTA TGTTGCCCAA CGATCCGGCT GGGTTTCGGA CGAAAGCCAT
TGGCGTGCGG AGACGCGCGC GGTAGAAGAT CGGTTGTCGG ACGCGTTGCA CGCGGCTCTG
ACGCAAAGAT TCGTGGACCG GCGCACTTCC GTGCTGCTGC GCCGGCTCAA ACAGAAGGAG
AGCCTTTTGG CCGAGGTGAA TGACAAGGGC GAAGTGACGG TCGAGGGCGA GTTCGCCGGT
CGTCTGGAGG GCTTCCGCTT CCACGCCGAT CCGAGCGCAA CCGGGGACGA GGCGCGCATG
CTGCAGCGCG CCGCCTATGA GGCGCTGCGC CCCGAATTCC ATCTGCGCGC CGACCGCTTC
TACAACGCGC CGGATACCGA GCTGGACTTC ACCGAACAGG GCGGCCTGAT GTGGGGCAGT
TCGGCGGTGG GCAAGCTGGT CAAGGGCGGC GAGGCGCTGA AGCCCGGCGT CGAGCCCTTC
GTCGACGAAG AGGCCGGGCC CGAGATCGCC GAGAAGGTGC GCCGCCGCCT CCAGCATTTC
GTCGACCGCA AGATCGCCAC CCTGTTCGAG CCGCTGCTGG CGCTGAAGAA CGACGAGACG
CTGGCCGGGC TGGCCCGCGG TTTCGCCTTT CGCCTGCTCG AATCCTTCGG CGTGCTGCCG
CGCGAGGGCG TGGCCACCGA GGTCAAGGAA CTGGATCAGG ATGCGCGCGG CCTCTTGCGC
AAGCATGGCG TGCGCTTCGG CCAGTTCACC ATTTTCCAGC CGGCGCTCTT GAAGCCGGCG
CCGACCCGGC TGCGGCTGGT GCTCTGGGGT CTGGACCAGG GCCTGTCCGA GTTCCCCGAA
AGCCCGCCCC CCGGGCTGGT GACGATCCCC AACCTGCCGG ACGTGCCAAA GGGCTATTAT
ACGCTTTCGG GCTATCACCC GGCGGGCGAG CGGGCGATCC GCATCGACAT GCTGGAGCGG
CTGGCCGACA TGCTGCGCAG CCAGGACAGC CGTGGCGGTT TCGAGGCGAC GCCCGACATG
CTGTCGATCA CCGGCATGAC GCTGGAGCAG TTCGCGGGCC TGATGCAAGG TCTGGGCTAC
CGCGCCGAAA AGGGCGAGCG TGCCAAGGTC CGCGCAGAGG CGGCGCCCGT CGCCGAGCCC
GCGCCGGAAG AGGCCGATCA CGAGCATCCG CTGACCGAGG AGGAAAGCGT GCTTGCCGCT
GAAACCCGGG CCAAGTGGGA GGCCGAGCAG GCCGCCCGCA AGGCCGCGGA GGCGGAAGCC
GAGGCTGCGG CCGGAACCGG CGACGAGGCT GCCGAGCCTG CCGCGGCCGA GATGGAGCTG
TTCTATACCT TCACCTGGGC GCCGCGCCCG CGGGGCGGCC ATCGCCGGCC CGAGCGGGGC
GAGCGTCACG GCCAAGGCCA GCCGCGTCCC CAGGGCGAGC GCGGCCCGCG CCGCGAGCGC
GAGGCGGGAT CGGAAAAGGC CGGGCAGGAG AACAGGCGCG AGGGCAAGCC CTTCGAGGGC
AAGCGTCGCG ACGAGCAGCG TGGCGAGCGC GGCCCGAAAG GCAAGCCCAA GGGCAAGCCG
CGCCATGACG GTCCCAAGAG TTTCGAGGCC CGCCCGCCGC GGGCCGAGAA GCAGGCCGAT
CCCGACAGCC CCTTCGCCAT CCTCGCCGCG CTCAAGAACA AGTCGTGA
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| Protein sequence | MQDRSRVTAV LGPTNTGKTH YAIDRMLAHR TGVIGLPLRL LAREVYDRIV KARGPSVVAL
VTGEERIVPE RVQYWVATTE AMPEVGADFV AIDEIQLCAD PERGHVFTDR LLNMRGLHET
LLLGSDTMRP AIAALVPQVQ FMRRERFSTL SWAGSKKISR MPPRSAIVCF SVEEVYATAE
LIRRQKGGCA VVMGALSPRT RNAQVAMYQQ GEVDYLVATD AIGMGLNLDI RHVAFSATEK
FDGRRYRPLF PHELGQIAGR AGRHTEPGTF GVTGDAGPLE EGLIEAIENH RFQPISRLMW
RNGALEFGTV ERLLQSLETQ PQSEWLARGR EADDMRALKA LSAMPEIRDS MSHPRDVRLL
WDVCRIPDFR GISPVEHATL LARIFGFLRE GGVPRDWLAG QIARIDKTQG DIDTLSKRLA
YIRTWTYVAQ RSGWVSDESH WRAETRAVED RLSDALHAAL TQRFVDRRTS VLLRRLKQKE
SLLAEVNDKG EVTVEGEFAG RLEGFRFHAD PSATGDEARM LQRAAYEALR PEFHLRADRF
YNAPDTELDF TEQGGLMWGS SAVGKLVKGG EALKPGVEPF VDEEAGPEIA EKVRRRLQHF
VDRKIATLFE PLLALKNDET LAGLARGFAF RLLESFGVLP REGVATEVKE LDQDARGLLR
KHGVRFGQFT IFQPALLKPA PTRLRLVLWG LDQGLSEFPE SPPPGLVTIP NLPDVPKGYY
TLSGYHPAGE RAIRIDMLER LADMLRSQDS RGGFEATPDM LSITGMTLEQ FAGLMQGLGY
RAEKGERAKV RAEAAPVAEP APEEADHEHP LTEEESVLAA ETRAKWEAEQ AARKAAEAEA
EAAAGTGDEA AEPAAAEMEL FYTFTWAPRP RGGHRRPERG ERHGQGQPRP QGERGPRRER
EAGSEKAGQE NRREGKPFEG KRRDEQRGER GPKGKPKGKP RHDGPKSFEA RPPRAEKQAD
PDSPFAILAA LKNKS
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