Gene Pden_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1798 
Symbol 
ID4580498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1790968 
End bp1791966 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID639769118 
Productsulfate ABC transporter, periplasmic sulfate-binding protein 
Protein accessionYP_915591 
Protein GI119384535 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4150] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.655228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCC GCAAGCTTCA CGTCGCCGCA CTGGCCCTGC TCCTGGGCAG CAGCCCGGCG 
CTTGCCCAGG ACAAGATCCT GAATGTCAGC TATGACATCG CCCGCGAACT GTTCGAGGCG
CTGAACCCCG AATTCCAGGC CTATTGGAAG GACAAGACCG GCCGCGACGT GACCATCGAC
CAAAGCCATG GCGGCTCGTC GAAACAGGCG CGCGCCATCC TAGAGGGGCT GCCGGCCGAT
GTGGTCACCT TCAACCAGGA GACCGACGTG GACGTGCTGG CGCAGAACGG GCTGGTGGCC
GAGGACTGGC GCGATGCCCT GCCGAACGGC GCCTCGCCCT ATTACTCGCT GCCGGCCTTC
CTGGTGCGCG AGGGCAATCC CAAGGGCATC AAGGACTGGT CGGACCTGGC GCGCGACGAC
GTGCAGGCGG TGTTCCCGAA CCCCAAGACC AGCGGCAACG GGCGCTATAC CTATCTGGCC
GCCTATGCCT ATGCCCTGAC GCAAGAGGGC GGCACGCCCG AGAAGGCGCA GGAATTCGTC
GGCAAGATCT TTGCCAACGT GCCGGTCTTC GACACCGGCG GCCGCGCCGC CACCCAGACC
TTCGCCGAGC GCAATATCGG CGACGTGCTG ATCACCTTCG AGGCCGAGAC CAAGGGCATC
GCCAAGCAAT ACGAGGCGCA GGGCTTCGAG GCCGTGACCC CGGCGACCAG CCTGTTCGCC
GCCTTCCCGG TCGCGCTGGT GACCGAGAAT GCCGAAAAGA ACGGCTCGGC CGAAGTTTCG
ACCGAATATC TCAACTGGCT CTATTCGCCC GAGGCGCAAG AGACGCTGGC CGAGAACCAT
TACCGCACCA CGGACGAGGC GGTTACGGCG AAATACGCCG CCGAGTTCCC CGAGGTGAAG
CTCTTGACCG TGGACGAGGT CTTCGGCGGC TGGGACAAGG TCACGGCCGA GCACCTGGCC
GAGGGCGGCA TCCTCGACAA GGTCTTCGTC AACCAATGA
 
Protein sequence
MMIRKLHVAA LALLLGSSPA LAQDKILNVS YDIARELFEA LNPEFQAYWK DKTGRDVTID 
QSHGGSSKQA RAILEGLPAD VVTFNQETDV DVLAQNGLVA EDWRDALPNG ASPYYSLPAF
LVREGNPKGI KDWSDLARDD VQAVFPNPKT SGNGRYTYLA AYAYALTQEG GTPEKAQEFV
GKIFANVPVF DTGGRAATQT FAERNIGDVL ITFEAETKGI AKQYEAQGFE AVTPATSLFA
AFPVALVTEN AEKNGSAEVS TEYLNWLYSP EAQETLAENH YRTTDEAVTA KYAAEFPEVK
LLTVDEVFGG WDKVTAEHLA EGGILDKVFV NQ