| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1780 |
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| Symbol | |
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| ID | 4580964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1772014 |
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| End bp | 1773369 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639769098 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_915573 |
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| Protein GI | 119384517 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGC TATCGCGCCG CATGGCGATT TCCGTGATCC TTCCGCTTGC GGCGGGGCTT
TCCCCCTTGG CCGCCCTGGG ACAGGATCCC TCGCAGATGC CGCCGCCGGC CGTGACGGTG
GTGACGCTCC ATGCCCAGGA CGTCGCCCTG ACCACCACCC TGCCCGGCCG CGTCACCGCC
TCGGCCGAGG CCGAGGTGCG GCCGCAGGTC AACGGCATCG TCACCGAGCG CCTGTTCGAG
GAAGGCAGCC ATGTGAAGGT CGGCGACCCG CTGTTCCGCA TCGACGCCAC CACCTATCAG
GCCGCCGTGG CCCAGGCCGA GGCCGCCGTG GCCCAGGCCC GCGCCCAGGC CGAGGCGGCG
CGCCGCGAGG CCGAGCGCGT CGGCGCCCTG CGCGACCGCC GCGTCGCCAG CGAAAGCACG
ACCGACAATG CCATCGCCGC CCGCGATTCC GCCGAGGCCG CCGTCAAGGT CGCCGAGGCG
CAGCTGCAGA CCGCCCGGAT CGAACTGGAA CGCACCACGA TCCGCGCCGA GCTGGATGGG
GTGATCGGCC TCGCGCAGAC CAGCCAGGGC GCGCTGGTGA CCGCCAGCCA GCCGACGCCG
CTTGCGGTGA TCCGCAAGCT CGACCCGGTG CATGTGGACG TGACGCAATC GGCGGCCGAG
CTCATCCGCT TCCGCCGCGA GATGGCTGCG CAGGACGCCG AGGGCCAGCA GGACCGCAAG
GTGACGCTGC GCCTGGCGGA CGGCACCCAA TACGGCCACG AAGGCCGGCT GACCGCCGCC
GAGCCCTATG TGAACGAGAC GACCGGCGTG GTGACGCTGC GGCTGTCCTT TGCCAATCCC
GACGGCATCC TGCTGCCCGG CATGTATGTG CAGGCCGTCG TCCAGCAGGC CACGGCGCGC
AACGTGATCC TTGCCCCGCA AGAGGGCGTC ACCCGCGACC GCCGCGGCCA GCCCGTCGCA
CTGGTGGCCA ATGCCGACAA CGCGGTCGAG CAGCGCCCCC TGACCATCCT TCAGGACATG
GGCAACAGCT GGATCGTCGG CGAGGGGCTG AATGACGGCG ACCGCATCAT CGTCGAGGGC
TTGCAGAAGA TCGGCCCCGG CATGACCGTC GCCCCCGAGG AACGCCAGGC CGCCGCGCCG
GCGGCCGCCG AAGGGGGCGC CGCCCCGGAT GCCGGCGAGC CCACGCCCGA AGCCGCCGAC
ACCGGAGAAC AACCCGCGCC CGAGGCCGGA GAAGCAGAGC AGCCCGCCAC CCAGCCCGAG
ATTGAGGCTG AGGCTGAGGC TGAGGCTGAG GCCGAGGGCC AGGGCGAGGA TGCGCAGCCC
GCAACCGAGG CCGGCGCCGA ACAGCCGGCG AACTGA
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| Protein sequence | MFALSRRMAI SVILPLAAGL SPLAALGQDP SQMPPPAVTV VTLHAQDVAL TTTLPGRVTA
SAEAEVRPQV NGIVTERLFE EGSHVKVGDP LFRIDATTYQ AAVAQAEAAV AQARAQAEAA
RREAERVGAL RDRRVASEST TDNAIAARDS AEAAVKVAEA QLQTARIELE RTTIRAELDG
VIGLAQTSQG ALVTASQPTP LAVIRKLDPV HVDVTQSAAE LIRFRREMAA QDAEGQQDRK
VTLRLADGTQ YGHEGRLTAA EPYVNETTGV VTLRLSFANP DGILLPGMYV QAVVQQATAR
NVILAPQEGV TRDRRGQPVA LVANADNAVE QRPLTILQDM GNSWIVGEGL NDGDRIIVEG
LQKIGPGMTV APEERQAAAP AAAEGGAAPD AGEPTPEAAD TGEQPAPEAG EAEQPATQPE
IEAEAEAEAE AEGQGEDAQP ATEAGAEQPA N
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