| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1760 |
|---|
| Symbol | |
|---|
| ID | 4580924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1746218 |
|---|
| End bp | 1747240 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639769075 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_915553 |
|---|
| Protein GI | 119384497 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.146114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.299859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCT ATTACGATCG CGACTGCGAT GTGAACCTGA TCAAGGACAA GAAGATCGCC
ATGCTGGGCT ATGGCAGCCA AGGCCATGCC CATGCGCTGA ACCTGCGCGA TTCCGGCGCC
AAGAACCTGG TCGTCGCGCT GCGCGAGGGC TCCGCCTCGG CCAAGAAGGC CGAAGCCGAG
GGGCTGAAGG TCATGGGCAT TGCCGAGGCC GCCGCCTGGG CCGACCTGAT CATGTTCACC
ATGCCCGACG AGCTGCAGGC CGAGACCTAC AGGAAATACG TGCATGACAA CCTGCGCGAA
GGCGCCGCCA TCGCCTTTGC CCACGGCCTG AACGTGCATT TCGGCCTGAT CGAGCCGAAG
CCCGGCGTCG ACGTCATCAT GATGGCGCCC AAGGGTCCGG GTCACACCGT GCGCGGCGAA
TACACCAAGG GCGGCGGCGT GCCCTGCCTG GTCGCGGTGC ACCAGGATGC CACCGGCAAG
GCCATGGATA TCGGCCTGAG CTATTGCTCG GCCATCGGCG GCGGCCGCTC GGGCATCATC
GAGACCAATT TCCGCCAGGA GTGCGAAACC GACCTGTTCG GCGAGCAGGC GGTGCTGTGC
GGCGGCCTGG TCGAGCTGAT CCGCATGGGC TTCGAGACCC TGGTCGAGGC CGGCTACGAG
CCGGAAATGG CCTATTTCGA ATGCCTGCAC GAGGTGAAGC TGATCGTGGA CCTGATCTAC
GAAGGCGGCA TCGCCAACAT GAACTACTCG ATCTCGAACA CCGCGGAATA CGGCGAGTAT
GTCTCGGGCC CGCGCGTGCT GCCCTATGAA GAGACCAAGG CGCGGATGAA GGCGGTGCTG
ACCGACATCC AGACCGGCAA GTTCGTGCGC GACTTCATGC AGGAGAACGC CGTCGGCCAG
CCGTTCTTCA AGGCGACCCG TCGCATCAAC GACGAGCACC AGATCGAGAA GGTCGGCGAA
AAGCTGCGCG GCATGATGCC CTGGATCTCG AAGGGCAAGA TGGTGGACAA GGAGCGCAAC
TGA
|
|---|
| Protein sequence | MRVYYDRDCD VNLIKDKKIA MLGYGSQGHA HALNLRDSGA KNLVVALREG SASAKKAEAE
GLKVMGIAEA AAWADLIMFT MPDELQAETY RKYVHDNLRE GAAIAFAHGL NVHFGLIEPK
PGVDVIMMAP KGPGHTVRGE YTKGGGVPCL VAVHQDATGK AMDIGLSYCS AIGGGRSGII
ETNFRQECET DLFGEQAVLC GGLVELIRMG FETLVEAGYE PEMAYFECLH EVKLIVDLIY
EGGIANMNYS ISNTAEYGEY VSGPRVLPYE ETKARMKAVL TDIQTGKFVR DFMQENAVGQ
PFFKATRRIN DEHQIEKVGE KLRGMMPWIS KGKMVDKERN
|
|---|
| |