Gene Pden_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1758 
Symbol 
ID4580922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1745177 
End bp1745638 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content70% 
IMG OID639769073 
ProductAsnC family transcriptional regulator 
Protein accessionYP_915551 
Protein GI119384495 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00375085 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC TGGCCCCGGA TGCGACCGAC CTTGCCATCC TGCGGCTTCT GGCCGAGGAC 
GCTACTCGCG GCGCGGCCGA GATCGGCCGG GCGCTTGGCC TGACCCAGCC CGCGACTTGG
CGGCGCATCC GGCGGCTGAG CGATGCCGGG GTGATCGCCG GGCGTCGCGT GGTGGTCGAC
GAGGCCGCCC TGGGTTTCGG CGTCACGGTG TTCCTGGGCA TCCGGCTGGC GGTGAAGGGC
CGTGTCAGCC TGGAGGATTT CGAACGCGCG GTGACGGCGA TCCCCGAGGT GCAGGTGGTG
CAGCATGTGC TGGGCCAGTT CGACTATCGG CTGCGCATTC ATGCCCGCGA CATCGCGGAT
TTCGAGCGCA TCCTGCGCCG TCGCATCATG ACCCTGCCCG GCGTGGGCCA GGTCGAGGCG
AACGTCATGC TTTCGGAAGA GCGGCGACCG GGGCCGCTCT AG
 
Protein sequence
MSVLAPDATD LAILRLLAED ATRGAAEIGR ALGLTQPATW RRIRRLSDAG VIAGRRVVVD 
EAALGFGVTV FLGIRLAVKG RVSLEDFERA VTAIPEVQVV QHVLGQFDYR LRIHARDIAD
FERILRRRIM TLPGVGQVEA NVMLSEERRP GPL