Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1739 |
Symbol | |
ID | 4581249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1728497 |
End bp | 1729609 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769054 |
Product | ABC polyamine/opine transporter, periplasmic substrate-binding protein |
Protein accession | YP_915532 |
Protein GI | 119384476 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.124985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC AAGAACATCC AACAGGAGAG CCATCCATGA AAGAACGCCT CATCTTCACC ACCGCACTGA CGCTGCTCGC CACCACGGCC GCGGGACAGG AGATCACCGT CATGTCCTGG GGCGGCACTT ACGGCCAAAG CCAGGTCGAG GCCTATCACA AGCCCTTCAC CGCCAAGACC GGCATCAAGA TCGTCTCGCT CGACAGCGAC AACCCGGCGA TCCCGGTCAA GGCGCAGGTC GAGGCGGGCA ATGTCTCGAC CAATGTGGCC GATGTCGAAT ATGCCGACGC GATCCGGCTG TGCGACGAGG GGCTGCTGGA GCCGATCGAC CCGGCGATCC TGCCGCCCGC ACCCGACGGC ACCCCCGCGA CCGAGGACTT CCTGCCTCAA GGTCTCAGCG ATTGCGCGGT GGGCTCGATC GTGTTCTCGA CGATCTTTGC CTATGACGCG ACGAAATATC CCGACGCCAA GCCGCAGACC ATCGCCGACT TCTTCGACAC GCAGAAATTC CCCGGCAAGC GCGGGATCAA GAAGGTGCCC AAGGCCGTTC TGGAAGTGGC ATTGATGGGC GACGGCGTGC CGGCGGACCA GGTCTACGAG GTGCTTGGCA CCCCCGAGGG CGTCGACCGC GCCTTCGCCA AGCTCGGCAG CATCAAGAAG GACACCGTCT GGTGGGAGGC CGGCGCACAG CCGCCGCAAC TGCTGGCCGA TGGCGAGGTG GCGATGACCA TGGCCTATAA CGGCCGGATC TTCGGCGCCG CCGTATCCGA GGGCAAGCCC TTCGAGATCG TCTGGGACGG GCAGGTCTAC GAATACAACC TTTTCGTCAT TCCAAAGGGC GCCCCGAAGC AGGACGAGGC GCTGGAATTC ATCAAGTTCG CGACCGACAC CCAGCGGCTG GCGGATCAGG CGAAATGGAT CAGCTACGGC CCGGCGCGGA AATCATCGGC CGAGCTGGTG GGGCTCTACC AGGACGGCAA GACCGAGATG GCGCCGCATA TGCCGACCAA TCCCGACAAC ATGAAGAACG CGCTGGGTTC GTCCTATGAG TTCTGGGTCG ACCACGAAGC GGAGCTGGTG GAGCGCTTCA GCGCCTGGCT CAGCGCCAGT TGA
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Protein sequence | MKKQEHPTGE PSMKERLIFT TALTLLATTA AGQEITVMSW GGTYGQSQVE AYHKPFTAKT GIKIVSLDSD NPAIPVKAQV EAGNVSTNVA DVEYADAIRL CDEGLLEPID PAILPPAPDG TPATEDFLPQ GLSDCAVGSI VFSTIFAYDA TKYPDAKPQT IADFFDTQKF PGKRGIKKVP KAVLEVALMG DGVPADQVYE VLGTPEGVDR AFAKLGSIKK DTVWWEAGAQ PPQLLADGEV AMTMAYNGRI FGAAVSEGKP FEIVWDGQVY EYNLFVIPKG APKQDEALEF IKFATDTQRL ADQAKWISYG PARKSSAELV GLYQDGKTEM APHMPTNPDN MKNALGSSYE FWVDHEAELV ERFSAWLSAS
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