| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1702 |
|---|
| Symbol | |
|---|
| ID | 4581328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1686315 |
|---|
| End bp | 1687565 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639769016 |
|---|
| Product | PimS2 protein |
|---|
| Protein accession | YP_915495 |
|---|
| Protein GI | 119384439 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.665919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCC ATGCCGATCT GATCGTGCTG GGGGGCGGGC CTGCGGGCGC CGTTTCGGCC
TGGCTTGCGG CGCGCGAGGG GCTGGGCGTG CTGCTGGTCG ATCCCGACCG CCAGCGCCCG
CGGATCGAGG GGCTCAGCCC GCGCCTGCAT CGCTGGCTGG CGCAGCAAGG GTTGCTGCGC
GGCTTTGCCC ATACCCACGG GCCCTTGCGG CGGCAGGTGG ATTGGGCGGG GATCAGCGAC
AGCAATGCGG AACATGTGGT GCTGCGCGGT GCGCTGGATG CGCATCTGCG GCAAGCGGCG
GTGGCCGCCG GTGCGGTGCC GGTCGTCGCC AGCGGCAGGC CCGAGGCGGG TGGTGCCGTG
CTGTCTGACG GCCGGCGGCT TCATGCCCCG CTGGTGATCG ATGCGCGCGG TCGCAATGCG
CCGGCAACGG CCGGGCGGGC GCCCGCGACG GTGGCCCTGT CGGGCTGGGT CCGGGCGGCG
CTGCCCCCCG GCATCCGGCT GACCGCCTTT GCGCGGGGCT GGCTCTGGCG CGTGGCGCTG
CCCGATGGCC GGGTCTGGGC GCAGGCCATG CTGGATGCGG CGGGCGAGGG CGACCCGCAG
GCACGGCTCC TGGCCGCGCT CGTCGAGGCC GAGCCCGCGC TTTGCGCCGC ACCGGCGGGC
CCGGTGCTGG CGCGCGAAGC GGCGCCGCGG CTGCCGGCCC CGGTCGCGGA CCTGGCGCTG
TTGCGCGTCG GCGATGCCTT TGCCGCGATG GACCCGCTGT CGGGGCATGG CCAGTTCTGG
GCGGTATCGA GTGCGCTGGC CGTCGCCGCC GTCCGCCGCA CCCTGGCCGC CCGGCCGGGA
TCAGGTCCGC TATGCCGCCG CTTCCTGATC CGCCGCGCCT GGGAGAGCAG CCTGCACCAG
ATGCGCGTCG GCCGCGACTT CCTGCGCGCC GAGACCCGCT TTCGCGACGC GCCCTTCTGG
TCGGCACGCC GGGACTTTCC CGACGATCAC CCGCTCATCG CACCGACCGC GCCCCGGATC
GAGCCCGCCA TCCTGGTCGA GGACGGATTG CTGGCCGAGC GCGAGTTGCT CTGCACCCCC
CGCTCGCCCG GCGGCATCGG CTGGTTCGGC GCGATCCCCG CACCCGAGGT CTGGCGCCTC
TGGCAGCGGG GCGGCGAAGC GGCGCTGCAG GCGCGATGGG GCGGCGCGGC TCCCGCCCTT
GCCCGGAAGT TGTTGTCCGA AATCGCCCCC TGGCCCGCCA GCGCAGCCTG A
|
|---|
| Protein sequence | MTRHADLIVL GGGPAGAVSA WLAAREGLGV LLVDPDRQRP RIEGLSPRLH RWLAQQGLLR
GFAHTHGPLR RQVDWAGISD SNAEHVVLRG ALDAHLRQAA VAAGAVPVVA SGRPEAGGAV
LSDGRRLHAP LVIDARGRNA PATAGRAPAT VALSGWVRAA LPPGIRLTAF ARGWLWRVAL
PDGRVWAQAM LDAAGEGDPQ ARLLAALVEA EPALCAAPAG PVLAREAAPR LPAPVADLAL
LRVGDAFAAM DPLSGHGQFW AVSSALAVAA VRRTLAARPG SGPLCRRFLI RRAWESSLHQ
MRVGRDFLRA ETRFRDAPFW SARRDFPDDH PLIAPTAPRI EPAILVEDGL LAERELLCTP
RSPGGIGWFG AIPAPEVWRL WQRGGEAALQ ARWGGAAPAL ARKLLSEIAP WPASAA
|
|---|
| |