| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1700 |
|---|
| Symbol | |
|---|
| ID | 4581326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1684450 |
|---|
| End bp | 1684839 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639769014 |
|---|
| Product | ribulose-bisphosphate carboxylase |
|---|
| Protein accession | YP_915493 |
|---|
| Protein GI | 119384437 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4451] Ribulose bisphosphate carboxylase small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.211216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCA CTCAGGGCTG CTTTTCCTTT CTGCCCGACC TGACGGACGA GCAGATCCGC
GACCAGGTCG AATACATCCT GTCGCGCGAC TGGGCGGTCG GGATCGAGTT CACCGACGAA
CCCCATCCCC GCAACACCTA TTGGGAGATG TGGGGCAATC CGATGTTCGA CCTCAAGGAC
GCCAAGGGCG TGATGATGGA GCTGGACGAA TGCCGCAAGG CGCATGGCGA CAGCTATATC
CGCATCAACG CCTTCGACAG CACGCGGGGA TGGGAGACGG TGATGATGTC CTTCATCGTC
AACCGCCCGA AATCGGAGCC CGGCTTCAGG ACATGGCGGA TGGAGGCCGA CGGCCGGCAT
ATCCGCTATA CGCATGAGCT GGTCGGCTGA
|
|---|
| Protein sequence | MRITQGCFSF LPDLTDEQIR DQVEYILSRD WAVGIEFTDE PHPRNTYWEM WGNPMFDLKD
AKGVMMELDE CRKAHGDSYI RINAFDSTRG WETVMMSFIV NRPKSEPGFR TWRMEADGRH
IRYTHELVG
|
|---|
| |