| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1646 |
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| Symbol | |
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| ID | 4580828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1627208 |
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| End bp | 1627768 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639768960 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_915439 |
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| Protein GI | 119384383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.351495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT TCTGGAAGCA TCTCGATCAT CTCGAGAGCT ACATCTGCCG CGCGCTGCTG
GCGGTCTTCG TCACGCTGCT TTTCGTCCAG ATCGTCGCCC GGCAGATCTT CGGCTTCTCG
ATCACCTGGA TCGAGGAACT GTCCGTCATC CTCTTCGTCT GGTTCGCCTA TTTCGGCGCG
TCCTATGCGG CGCGCATGGC GGCGCATAAC CGGGTGACCT TCCATCTGAA CATGATGCCG
CGCAAGGCGG CGCGCGTGCT GGAGGCGATC GGGGACCTGT TCTGGATCAT CTTCAACGTC
GTGTTCATCT GGCAGGCCAT CCAGTTCATC AGCCGGCTGA AGCCCTTCGT GAAGGCCCAG
ACCCTGGGTT GGGAGATGCG CTACGTCTAC ATGGCGCTGC CCATCGCCTT TGCGCTGATG
ACCATCCGCA TCCTGCAGGT GAACTATCTG AAGCTCGTGA AGGGCATCGA CCCGCGCGAC
CCCGACAAGG TCGAGGTCGA GGAAATGCTG GAACTCGCCG CCGATGAGCA GCGCGCCTAC
GAGCGGGAGC ACAAGAAATG A
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| Protein sequence | MSAFWKHLDH LESYICRALL AVFVTLLFVQ IVARQIFGFS ITWIEELSVI LFVWFAYFGA
SYAARMAAHN RVTFHLNMMP RKAARVLEAI GDLFWIIFNV VFIWQAIQFI SRLKPFVKAQ
TLGWEMRYVY MALPIAFALM TIRILQVNYL KLVKGIDPRD PDKVEVEEML ELAADEQRAY
EREHKK
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