| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1628 |
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| Symbol | |
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| ID | 4581008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1608270 |
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| End bp | 1610312 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768943 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_915422 |
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| Protein GI | 119384366 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.58484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAT TGAGGAATAC GACCGCGGAT ATGCTGGCTT GCCTGCCGCT GTGGCTGGCG
GTGACGGGCG CGGCCCTGCC GGTGCTGGCC GTGCCGGCGC TGGTGCAGGC GCAGGACACG
CAGGACGCGG CGGAGGGGGC GGTCGTCCAG CTCGACACCA TCGTCGTCAC CGCCAGCGGC
CATGCCCAGA CCTTGCCCGA CGCGCCGGCG ACGGTCACGG TCATCGACGG CGAGGAGATC
ACCTCGAAAC CCTATGCCAC CGTGGCCGAT GTGCTTCGCA ACGTGCCGGG CGTGATCGTC
AGTGCGCCTT CGGGCCGTTC CGGGGCCGAG ACCATCTCGA TCCGGGGCCT GGGCGAGAGC
TATGTACTGA CCCTGGTCGA CGGCAAGCCC ATCGGCAACT CGCAGGAGGC GACCTATAAC
GGCTTCGGCT CGGAGTTGGC GATGTCCTAT CTGCCGCCGC CCTCGGCCAT CGAGCGGATC
GAGGTGATCC GCGGGCCGAT GTCCTCGCTC TACGGCTCGG CGGCTTCGGG CGGGGTGATC
AACATCATCA CCAAGCCGGT GTCGGATGTC TGGTCGGGCT CGCTGACGCT GGGGACCAGC
CATTACAAGC ACGGCGGCGC CGGCGATGCC AACGAGGGGC GGTTCTATCT CAGCGGCCCG
CTGCTCCAGG ACCGGCTGGG GCTGGCGCTG TTCGGCTCGC GCCATGACCG CAGCAAGGAC
GAGATGGCGG TTTCGGGCCG TGGCGGCAGC GTGAGCTATC AATCCCAGGA CATCGAGCGC
AAGTCGCTGG GCGCCCGCCT GACCTGGAGG ATCGATGAGC GGCAGGACCT GGATTTCGAG
ACGGTCTACA GCGCGCAGGA CACCACCTCG GCCCCGCTGG ACGGCGGCAC GCCCGGCGGG
ATCAGCCTCA AGCGCATGAA TTATGCCCTG TCGCACGACA TCCGCTGGGG CGACGACTAC
AGGACCGAGA CCTTCCTGAC CTTCGAGGAT GTCGATTTCG AGAACGGCTC GAACGTCTCG
GGCTATGAGA TGCTGAACCT GAACACCAGG ACCAGCATGA GCCTGGGCCG GCACGACCTG
ACCTTTGGTG CCGATTGGCG CGACGAGACC ACCCGGCACG ATCCGAGCCG CGTGAACGTG
GATCCGAAGA TGACCCGCTG GCAATGGGCG CTGTTCGCCG AGGACAATTT CCACTTGCGC
GACGACCTGA CCCTGACGCT GGGGATGCGC TACGACCACA ACGAACGCTA TGGCTCGCAG
ATCACGCCGC GGCTCTATGC GGTCTGGCAT GCCAACCCCT CGCTGACGCT CAAGGGCGGG
GTCAGCGGCG GCTACAAGAC GCCGACGCTG AAACAGGCCG ACAGCAACAT CTTCGAGCCA
TCGGGCGGCG ACGGCCGGGC GCGCGACCAG GGCAATACCG ACCTGAAGCC CGAGGAAAGC
ACCAATTACG AGCTCGGTGC GATATGGGAG ACGGCGGGCG GCGTGCAACT GGGCCTGACC
GCCTATCACA CCCGGTTCAA GAACAAGATC ACCACCGAGC AGATCTGCGC CCATGACACG
CCGGTTCCGG GCTTGCCGAC GGATTGCGGC ATGAACACGC CGACCGATCC GATCAAGTGG
ATCAACCAAT ACGTCAACCG CGATGCCGCC GAACTGAACG GGGTCGAGGC CACGGTGGAC
TTCACCCTGC GCAACGTCGA CGTTTCGTTC AACTATACCT ATGCCGACAG CAAGATCACC
AAAGGCGCGG ATGTCGGCGC CGCCTTCAAC AACAGCCCGC TGCATGTCGC GAACCTTGGC
CTCGACTGGC AGGCCACCGA TGCGCTGTCG CTGTGGAGCA ACATCCAGTA TCGCAGCGCG
ACCACCGATT CCGGCAGCGG CTATATCCGC GAGCATGCGA TCGTCGATCT GGGCGCCGAC
TACCGCTTCA ACGACAATGT GATGGGTAGC CTTGCCATCT ACAATGTCGA TGACAAGACC
TTCGACAATA CCGGCTACAA CGATGGCCGC CGGTTCTACA TGGGCCTGAC CAGCACCTTC
TGA
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| Protein sequence | MRRLRNTTAD MLACLPLWLA VTGAALPVLA VPALVQAQDT QDAAEGAVVQ LDTIVVTASG
HAQTLPDAPA TVTVIDGEEI TSKPYATVAD VLRNVPGVIV SAPSGRSGAE TISIRGLGES
YVLTLVDGKP IGNSQEATYN GFGSELAMSY LPPPSAIERI EVIRGPMSSL YGSAASGGVI
NIITKPVSDV WSGSLTLGTS HYKHGGAGDA NEGRFYLSGP LLQDRLGLAL FGSRHDRSKD
EMAVSGRGGS VSYQSQDIER KSLGARLTWR IDERQDLDFE TVYSAQDTTS APLDGGTPGG
ISLKRMNYAL SHDIRWGDDY RTETFLTFED VDFENGSNVS GYEMLNLNTR TSMSLGRHDL
TFGADWRDET TRHDPSRVNV DPKMTRWQWA LFAEDNFHLR DDLTLTLGMR YDHNERYGSQ
ITPRLYAVWH ANPSLTLKGG VSGGYKTPTL KQADSNIFEP SGGDGRARDQ GNTDLKPEES
TNYELGAIWE TAGGVQLGLT AYHTRFKNKI TTEQICAHDT PVPGLPTDCG MNTPTDPIKW
INQYVNRDAA ELNGVEATVD FTLRNVDVSF NYTYADSKIT KGADVGAAFN NSPLHVANLG
LDWQATDALS LWSNIQYRSA TTDSGSGYIR EHAIVDLGAD YRFNDNVMGS LAIYNVDDKT
FDNTGYNDGR RFYMGLTSTF
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