| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1601 |
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| Symbol | |
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| ID | 4580208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1580445 |
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| End bp | 1581911 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768918 |
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| Product | major facilitator transporter |
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| Protein accession | YP_915397 |
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| Protein GI | 119384341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.101662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGA AACCACAGTC GCCGGACGAA CAGGCGCCGG ACGAACAAGC GCCGGTGACG
CATTGGGCGC TGGTCGCGCT GGCCATGGCG ATGCTGCTGT CCTCGCTGGG GATCAGCATT
CCCAACGTGG CGCTGCCGAC GCTGGCCGAT GCCTTTCGGA CGGGGTTGCC GCAGGTGCAA
TGGGTGGTGC TGGCCTATCT GCTGGCGATC ACCGTGCTGA TCGTCAGCGC CGGCCGGCTG
GGCGACATCG CCGGCCACCG CCGCGTGCTG TGCTGGGGTC TGGCCGGTTT CGCGCTCGCC
TCGACGCTTT GTGCCATGGC GCCGACGCTG CCGGCGCTGG TCGCGGCGCG GGCGCTGCAG
GGTGCGGCGG GGTCGATCCT GATGGGCCTG ACCGTGGCGC TGGTGCGCAC CAGCGTTTCC
AAGGAGCGCA CCGGCAGCGC CATGGGGCTG CTGGGCACCA TGTCGGCCAT CGGCACGGCG
GCGGGGCCGA CGCTGGGCGG GCTGTTGATC TCGGGCCTCG GCTGGCGGGC GATCTTTGCG
GTGATGGCGC CGCTGGCGCT GGCCGGGCTT GTCCTGGCGC AACGCTGCCT GCCTGCGGAT
GCGCAGCGGG GCCGGGTCGA TCACCGCGCT TTCGACAAGC CGGGCACGCT GGTCCTTGCC
CTGACCCTTG CCGCCTATGC GCTGGCCGTC ACCGCCGGGA ACGGCGCGTT TCACCGCCGG
AACCTGATCC TGCTGGCGCT GGTGGCGCTG GGTCTTGCGC TTTTCGTGCT GATCGAGCGG
CGCAGCCCCG CGCCGCTGGT GCGGCTGTCC GCCTTTCGCG ACCCGGCGCT GAACGCCGCG
CTGGCGATGA GCGCGCTGGT CTCGACCGTC ATGATGACGA CGCTGGTGGT CGGACCCTTC
TACCTGTCGC GGGTGCTGGG CCATCCGGCG GCGGTGGTCG GGCTGGTCAT GTCGGTCGGC
CCCGCCATCT CGGCGCTGAG CGGGGTGCCG GCGGGGCGGC TGGTGGACCG TTTCGGCGCG
AATGCGGTGG TGATCTGGGG GCTGGCGCAG ATGGCCGTGG GGGCTTTCGC GCTGGCCGGC
CTGCCCAACA TGCTGGGCAC GGCCGGCTAT GTCCTGGCGT TGGCGGTTCT GACCCCCGGC
TACCAGCTGT TCCAGGCGGC GAACAATACC GCGGTGATGA TGGAGGTGCC GCAGGACCGG
CGCGGCGTGA TCTCGGGCGT GCTGAGCCTG GCGCGCAATC TGGGGCTGAT CACCGGCGCC
TCGGCAATGG GTGCGGTCTT TACCCTTGCC TCGGGCAGCG CCAATCCGGC GACGGCCGGG
ACGGCTTCGG TGGCCCATGG CATGGCCGTG ACCTTTGCGC TGGCCGGCGG GCTGGCGCTG
CTGGGCCTTG TCATCGCCCT GTCAGGCGGA GCCTTCAATC TGGAGCGGAG CGGCAATACC
CCGCCGCGAC GGGGGGGTAA TTCTTGA
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| Protein sequence | MQPKPQSPDE QAPDEQAPVT HWALVALAMA MLLSSLGISI PNVALPTLAD AFRTGLPQVQ
WVVLAYLLAI TVLIVSAGRL GDIAGHRRVL CWGLAGFALA STLCAMAPTL PALVAARALQ
GAAGSILMGL TVALVRTSVS KERTGSAMGL LGTMSAIGTA AGPTLGGLLI SGLGWRAIFA
VMAPLALAGL VLAQRCLPAD AQRGRVDHRA FDKPGTLVLA LTLAAYALAV TAGNGAFHRR
NLILLALVAL GLALFVLIER RSPAPLVRLS AFRDPALNAA LAMSALVSTV MMTTLVVGPF
YLSRVLGHPA AVVGLVMSVG PAISALSGVP AGRLVDRFGA NAVVIWGLAQ MAVGAFALAG
LPNMLGTAGY VLALAVLTPG YQLFQAANNT AVMMEVPQDR RGVISGVLSL ARNLGLITGA
SAMGAVFTLA SGSANPATAG TASVAHGMAV TFALAGGLAL LGLVIALSGG AFNLERSGNT
PPRRGGNS
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