Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1559 |
Symbol | |
ID | 4580861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1531502 |
End bp | 1532680 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639768875 |
Product | polysaccharide export protein |
Protein accession | YP_915355 |
Protein GI | 119384299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.053083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0507525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGCAAG CACTTTTTTC GCCCCTTCGA TCCGGCGCGA CACCCATTCG TACGCGCAGC CTTGCCGCTC GTCTGACGCG GGCGATGATT CTGGGGGGGA TGCTTCTGGT TTCGGCCTGC GGGCTGCCGC GCTCTGGTCC CACCAAGGGC CAGATCCTTT CCAGTTCGGT GACCAAGGGC GGCACCACCC ATATCGTCAA TGTCGACGAC CGGGTGAACC GGGCCGCCAG CTATACCCCC GCCTACGGCT TCTCGGCCGA TTTCCGCGCA GCCAGCACGG TGGCCGCCGA CGATATCCGC CCCGGCGACG TGCTGGGGCT GTCGATCTGG GAAAACGTCG ATGACGGGCT GCTGGCCTCG ATGGGGTCGA GCTCGACCCA GCTGACCGAA TTGCAGGTCG ACAGCCAGGG CTACATCTTC GTGCCCTATG CCGGCCGGGT GCTGGCGGCG GGCAACAGCC CCGAGGAACT GCGCCGCATC ATCACCCAGA AGCTGGAAAC CCAGACCCCC GACCCGCAGG TCATGGTGAC CCGCGTCGCC GGCGACGGCG CCACCGTCTC GGTCATGGGC AAGGTGAACT CGCAAGGCGT CTATCCGATC GAGCGTCCGA CCCGCACCCT TTCGGCGATG CTGTCGCGTT CGGGCGGCGT CACCATCGAG CCCGAGATCG CCGTGATCAC CGTCAAGCGC GGCAATTCCA GCGGCAAGGT CTGGCTGCGC GACCTGTATT CCAGCGCGCG CAACGACATC GCGCTGCGCC CCGGCGACGT GATCCTGGTC GAAGAGGACG AGCGCAGCTT TACCGCGCTC GGCGCGCTTG GCGGCCAGAC CAAGGTGCCG CTGGGCAACG AACAGATCAA CGCCATCGAA GCCGTGGCCA TGGTCGGCGG CCTCAGCACC TCGCTGGCCG ATCCCAAGGG CGTCTTCGTT CTGCGCGAAG AGCCGCAGAC CGTGGCCCGC GCCGTGCTGG GCCGCGGCGA CATCCATGGC AACCAGCGCG TCGCCTATGT TCTGGACCTG ACCAAGCCCG ACGGCATGTT CCTGGCGCGC GATTTCATCA TCCGCGACGG CGACACGGTC TATGTGACCG AGGCACCCTT CGTGCAATGG CGCAAGACCT TGCAGTCGAT CCTGGGCACC GCCGCCGAAG TCGGCTCGGC CAACAGCGCC TTCGAGTAA
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Protein sequence | MTQALFSPLR SGATPIRTRS LAARLTRAMI LGGMLLVSAC GLPRSGPTKG QILSSSVTKG GTTHIVNVDD RVNRAASYTP AYGFSADFRA ASTVAADDIR PGDVLGLSIW ENVDDGLLAS MGSSSTQLTE LQVDSQGYIF VPYAGRVLAA GNSPEELRRI ITQKLETQTP DPQVMVTRVA GDGATVSVMG KVNSQGVYPI ERPTRTLSAM LSRSGGVTIE PEIAVITVKR GNSSGKVWLR DLYSSARNDI ALRPGDVILV EEDERSFTAL GALGGQTKVP LGNEQINAIE AVAMVGGLST SLADPKGVFV LREEPQTVAR AVLGRGDIHG NQRVAYVLDL TKPDGMFLAR DFIIRDGDTV YVTEAPFVQW RKTLQSILGT AAEVGSANSA FE
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