| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1508 |
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| Symbol | |
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| ID | 4581104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1474897 |
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| End bp | 1475661 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639768823 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_915304 |
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| Protein GI | 119384248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.324352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATGT CCAGCCCTCG TCCCGCCTCG GGGAGAGGTG GCATCTGCCG CCGCATTCTC
CTCCTTCTTC TTTCCGGCCT CCTCATCCCG GTCACCGCCA CGCAGACGCT CTTCGCGCAA
ACCGGTGTGC CCGAACACGC AATCGCCGCG CATCCCTATG CCGCCCAGGT CACCGAGGCA
TCGCAGCGCT TCGGCATTCC GACGACCTGG ATCATGGCCG TGATGCGGAC AGAGAGCGCG
GGCGATCTGC GCGCGGTGTC TTCCGCTGGC GCGATGGGGC TGATGCAGGT CATGCCCGAC
ACTTGGGCCG GGCTGCGCAT CCGTCATGGC CTCGGCCATG ATCCCTTCGA GCCGCGTGAC
AACATCCTCG CGGGCGCGGC CTATCTCCGT GAGATGTGGG ATCGCTACGG CAATGTCGCG
GCGATGCTGG CGGCCTATAA TGCCGGTCCC GCCCGCTACG ACGGATACCG ACTGGCGGAT
CGTCCGCTGC CAGCCGAGAC GCGTGCCTAT GTCGCTGCGC TTGCACCCGT TCTGCTTGGC
GAGCGGCCAT CGGGTATCGC CATCACTGCA GCCCGACCGC GCGATTGGCG TGAGGCGGCG
ATCTTCATCA GCCGCGAAGA CGGCGCGTCT GCGACCGATC CTGTGTCGCC TCACCGGGCG
GTCGGCGGCG CTGCTTCACC CGTCTCGGCG GCGCCGCAAG CGGGCCTCAC CCCGCAATCT
GAGGGCCTCT TCGTCCAGCG GGAGACTGGT GAGGCACGGC CATGA
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| Protein sequence | MIMSSPRPAS GRGGICRRIL LLLLSGLLIP VTATQTLFAQ TGVPEHAIAA HPYAAQVTEA
SQRFGIPTTW IMAVMRTESA GDLRAVSSAG AMGLMQVMPD TWAGLRIRHG LGHDPFEPRD
NILAGAAYLR EMWDRYGNVA AMLAAYNAGP ARYDGYRLAD RPLPAETRAY VAALAPVLLG
ERPSGIAITA ARPRDWREAA IFISREDGAS ATDPVSPHRA VGGAASPVSA APQAGLTPQS
EGLFVQRETG EARP
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