| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1485 |
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| Symbol | |
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| ID | 4580325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1446345 |
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| End bp | 1447265 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639768800 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_915281 |
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| Protein GI | 119384225 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.232503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTGA TCGAACCTCA TCGTTTCACC CCTTACGAGG CTGGTCGCAC TACGTCAGTC
ACCCTACCGG GACAGCATCG TAGTACTCAT GTCGATGTTC TTCGGATCTC ACCGGGACTG
GTATTGGCGC ACAGCCATTT TTCGTCCGCT CAGCGGCATA GCGGGGACAT ACGGCGTCCC
GAAGACCAGG TAATCCTAAC CTTCAATTTT TCCGGACGAA TGCTGTTGGT CGACCCGCGC
GGACATGCGC ATGAGATCAG CGGTGGGCAG GCGTGGCTGA TCCGATCCGG CGGCATGCAA
CTGAAACGGA TCGTGGAAAA GGGTGAAGGC TGTTCGAACC TTGTCATCGC CCTGAACGCC
TCCCGATTGA GCCCGGCGCT GGCCAACATG CTCGGGCACA ACCTGCCTGG CCCGATGCGG
GTCCGGCGTC TGAATCTGCC AGTTCCGGGT CGCGCGATGC TCACTGCTTT GCTCGACCAG
AGAACCGATC CTGCAGCCAT ATTGCGCAAG GAGGGACAAT GCCTTGCTCT ATTGGGTCAT
GCATTAGAGG AAGTTGCGGC CCATCCCCAG CAAGGTTCCG AGACACGCAA TCCTTGCCTT
TTGGTTGAAA GAATCTCGGC ACTTCTCTGC GAACGGCTGG CCGAACCCAT CACAATGACT
GAGATTGAAC ATGAGTTTGG TCTGAGCAGT GTTACATTGA ACCAACTCTT CCGAACCCGT
ACACGGGAAA CCGTTTTCGA ACATTTGCGC CGGTTGCGAA TCGAAGCAGC CGAACGTCTG
ATTCGTCAGA CAGATCGAAG TTTTACCGAA ATCGCGGCAG ACTGCGGTTT TTCCGATGCC
AGTCATCTAT CTAACGTATT CCGCAAGCGT TTCGGAACCA CAGCAAGTGC ATGGCGACGT
GCCGGAAAAC AAAATCAATA A
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| Protein sequence | MMLIEPHRFT PYEAGRTTSV TLPGQHRSTH VDVLRISPGL VLAHSHFSSA QRHSGDIRRP
EDQVILTFNF SGRMLLVDPR GHAHEISGGQ AWLIRSGGMQ LKRIVEKGEG CSNLVIALNA
SRLSPALANM LGHNLPGPMR VRRLNLPVPG RAMLTALLDQ RTDPAAILRK EGQCLALLGH
ALEEVAAHPQ QGSETRNPCL LVERISALLC ERLAEPITMT EIEHEFGLSS VTLNQLFRTR
TRETVFEHLR RLRIEAAERL IRQTDRSFTE IAADCGFSDA SHLSNVFRKR FGTTASAWRR
AGKQNQ
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